Information for 3-CTTGAGGTCTCTGGCT (Motif 4)

A G T C A C G T C G A T A T C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C G A C T A C T G A T C G A G T C A G C T
Reverse Opposite:
C T G A C T A G A T G C G T A C C T G A A C T G G T C A A C T G G T C A G T A C A G T C A C G T A T G C C G T A C G T A A C T G
p-value:1e-11
log p-value:-2.712e+01
Information Content per bp:1.899
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.8 +/- 14.1bp
Average Position of motif in Background68.1 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTTGAGGTCTCTGGCT
----AGGTCTCTAACC
 A G T C A C G T C G A T A T C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C G A C T A C T G A T C G A G T C A G C T
A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTTGAGGTCTCTGGCT
-TTGCGGTTT------
 A G T C A C G T C G A T A T C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C G A C T A C T G A T C G A G T C A G C T
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTTGAGGTCTCTGGCT
TTTGCGGTTT------
 A G T C A C G T C G A T A T C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C G A C T A C T G A T C G A G T C A G C T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTTGAGGTCTCTGGCT
--TRAGGTCA------
 A G T C A C G T C G A T A T C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C G A C T A C T G A T C G A G T C A G C T
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTTGAGGTCTCTGGCT
--TGACGTCA------
 A G T C A C G T C G A T A T C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C G A C T A C T G A T C G A G T C A G C T
A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CTTGAGGTCTCTGGCT-
---NAGGTCANTGACCT
 A G T C A C G T C G A T A T C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C G A C T A C T G A T C G A G T C A G C T A C G T
A C G T A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTTGAGGTCTCTGGCT
-CTGTGGTTTN-----
 A G T C A C G T C G A T A T C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C G A C T A C T G A T C G A G T C A G C T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CTTGAGGTCTCTGGCT
---AAGGTCAC-----
 A G T C A C G T C G A T A T C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C G A C T A C T G A T C G A G T C A G C T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTTGAGGTCTCTGGCT--
--GTAGGTCACTGGGTCA
 A G T C A C G T C G A T A T C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C G A C T A C T G A T C G A G T C A G C T A C G T A C G T
A C G T A C G T A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTTGAGGTCTCTGGCT
--AGRGGTCA------
 A G T C A C G T C G A T A T C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C G A C T A C T G A T C G A G T C A G C T
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T