Information for 13-TGAACTGAGGGCT (Motif 21)

C A G T A T C G T C G A T C G A A T G C C G A T T A C G C G T A C A T G A C T G C A T G A T G C A C G T
Reverse Opposite:
C G T A A T C G G A T C G T A C G A T C A C G T A T G C C G T A A T C G A G C T A C G T A T G C G C T A
p-value:1e-5
log p-value:-1.349e+01
Information Content per bp:1.688
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.62%
Number of Background Sequences with motif232.2
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets35.6 +/- 25.8bp
Average Position of motif in Background48.7 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGAACTGAGGGCT
TGCCCTGAGGGCA
 C A G T A T C G T C G A T C G A A T G C C G A T T A C G C G T A C A T G A C T G C A T G A T G C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGAACTGAGGGCT
TGCCCTNAGGGCA
 C A G T A T C G T C G A T C G A A T G C C G A T T A C G C G T A C A T G A C T G C A T G A T G C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGAACTGAGGGCT
ATGCCCTGAGGC--
 A C G T C A G T A T C G T C G A T C G A A T G C C G A T T A C G C G T A C A T G A C T G C A T G A T G C A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGAACTGAGGGCT
TGCCCTGAGGGCA
 C A G T A T C G T C G A T C G A A T G C C G A T T A C G C G T A C A T G A C T G C A T G A T G C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGAACTGAGGGCT-
TCACCTCTGGGCAG
 C A G T A T C G T C G A T C G A A T G C C G A T T A C G C G T A C A T G A C T G C A T G A T G C A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGAACTGAGGGCT-
----TTAAGTGCTT
 C A G T A T C G T C G A T C G A A T G C C G A T T A C G C G T A C A T G A C T G C A T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGAACTGAGGGCT
GGTCANYTGAGGWCA
 A C G T A C G T C A G T A T C G T C G A T C G A A T G C C G A T T A C G C G T A C A T G A C T G C A T G A T G C A C G T
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGAACTGAGGGCT
----CTAATKGV-
 C A G T A T C G T C G A T C G A A T G C C G A T T A C G C G T A C A T G A C T G C A T G A T G C A C G T
A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGAACTGAGGGCT
TGACCTYA-----
 C A G T A T C G T C G A T C G A A T G C C G A T T A C G C G T A C A T G A C T G C A T G A T G C A C G T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGAACTGAGGGCT
WTGSCCTSAGGS--
 A C G T C A G T A T C G T C G A T C G A A T G C C G A T T A C G C G T A C A T G A C T G C A T G A T G C A C G T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T