Information for 8-GAGGGCAGCW (Motif 16)

A T C G C T G A A C T G T C A G C T A G A G T C C T G A A C T G A G T C C G T A
Reverse Opposite:
C G A T A C T G A G T C A G C T A C T G G A T C A G T C G T A C A G C T A T G C
p-value:1e-7
log p-value:-1.835e+01
Information Content per bp:1.798
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif6.16%
Number of Background Sequences with motif506.0
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets50.9 +/- 24.5bp
Average Position of motif in Background51.1 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAGGGCAGCW---
NGNGACAGCTGCN
 A T C G C T G A A C T G T C A G C T A G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGCAGCW
TNNGGGCAG--
 A C G T A T C G C T G A A C T G T C A G C T A G A G T C C T G A A C T G A G T C C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GAGGGCAGCW---
-NNAGCAGCTGCT
 A T C G C T G A A C T G T C A G C T A G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GAGGGCAGCW---
---AGCAGCTGCT
 A T C G C T G A A C T G T C A G C T A G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GAGGGCAGCW----
---GACAGCTGCAG
 A T C G C T G A A C T G T C A G C T A G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGCAGCW------
NNNNAGCAGCTGCTGAN
 A C G T A T C G C T G A A C T G T C A G C T A G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GAGGGCAGCW-
---ANCAGCTG
 A T C G C T G A A C T G T C A G C T A G A G T C C T G A A C T G A G T C C G T A A C G T
A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GAGGGCAGCW----
----NCAGCTGCTG
 A T C G C T G A A C T G T C A G C T A G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GAGGGCAGCW
-----CAGCC
 A T C G C T G A A C T G T C A G C T A G A G T C C T G A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GAGGGCAGCW----
---AACAGCTGCAG
 A T C G C T G A A C T G T C A G C T A G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G