Information for 9-ACTAWTTTACWCTCAC (Motif 14)

C G T A A G T C A G C T G T C A C G A T C G A T A G C T A G C T G T C A G T A C G C T A G T A C G C A T A G T C G T C A G T A C
Reverse Opposite:
A C T G A C G T C T A G C G T A A C T G C G A T A C T G A C G T C T G A C T G A C G T A G C A T A C G T C T G A C T A G G A C T
p-value:1e-9
log p-value:-2.098e+01
Information Content per bp:1.669
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif16.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.6 +/- 25.0bp
Average Position of motif in Background51.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:1
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACTAWTTTACWCTCAC
-CNTGTTTACATA---
 C G T A A G T C A G C T G T C A C G A T C G A T A G C T A G C T G T C A G T A C G C T A G T A C G C A T A G T C G T C A G T A C
A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----ACTAWTTTACWCTCAC
NTTCGCTAATTAGCTNT---
 A C G T A C G T A C G T A C G T C G T A A G T C A G C T G T C A C G A T C G A T A G C T A G C T G T C A G T A C G C T A G T A C G C A T A G T C G T C A G T A C
G A C T G C A T G A C T G T A C T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A G T A C G T G C A T A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ACTAWTTTACWCTCAC
ANNNCTAGTTAACNGNN--
 A C G T A C G T A C G T C G T A A G T C A G C T G T C A C G A T C G A T A G C T A G C T G T C A G T A C G C T A G T A C G C A T A G T C G T C A G T A C
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ACTAWTTTACWCTCAC
NNNTTTGTTTACTTTTN-
 A C G T A C G T C G T A A G T C A G C T G T C A C G A T C G A T A G C T A G C T G T C A G T A C G C T A G T A C G C A T A G T C G T C A G T A C
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T A C G T

PH0131.1_Pax4/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---ACTAWTTTACWCTCAC
TGAACTAATTAGCCCAC--
 A C G T A C G T A C G T C G T A A G T C A G C T G T C A C G A T C G A T A G C T A G C T G T C A G T A C G C T A G T A C G C A T A G T C G T C A G T A C
G C A T T A C G T C G A C G T A A G T C C A G T C G T A C T G A A G C T G A C T G T C A C T A G G A T C A G T C T A G C C T G A G T A C A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-ACTAWTTTACWCTCAC
TTCTATTTTTAGNNN--
 A C G T C G T A A G T C A G C T G T C A C G A T C G A T A G C T A G C T G T C A G T A C G C T A G T A C G C A T A G T C G T C A G T A C
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:ACTAWTTTACWCTCAC-----
------TCACTTTCACTTTCN
 C G T A A G T C A G C T G T C A C G A T C G A T A G C T A G C T G T C A G T A C G C T A G T A C G C A T A G T C G T C A G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ACTAWTTTACWCTCAC
---ATTTTCCATT---
 C G T A A G T C A G C T G T C A C G A T C G A T A G C T A G C T G T C A G T A C G C T A G T A C G C A T A G T C G T C A G T A C
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T

PH0147.1_Pou3f2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---ACTAWTTTACWCTCAC
NNNACTAATTAATTANC--
 A C G T A C G T A C G T C G T A A G T C A G C T G T C A C G A T C G A T A G C T A G C T G T C A G T A C G C T A G T A C G C A T A G T C G T C A G T A C
G A T C C T G A G T C A T G C A G A T C C A G T G T C A C G T A C G A T C A G T C T G A C T G A C A G T G C A T G C T A G C A T A T G C A C G T A C G T

LHX2/MA0700.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ACTAWTTTACWCTCAC
ACTAATTAAC------
 C G T A A G T C A G C T G T C A C G A T C G A T A G C T A G C T G T C A G T A C G C T A G T A C G C A T A G T C G T C A G T A C
T C G A A G T C G A C T G T C A C T G A A C G T A C G T C T G A C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T