Information for 6-GSATTGTKWCAWCCTG (Motif 8)

A C T G A T C G G T C A A C G T A C G T A T C G A G C T C A T G C G A T T G A C G C T A C G T A G T A C A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G A C T G C G A T C G A T A C T G C G T A G T A C C T G A A T G C G T C A G T C A A C G T A T G C A G T C
p-value:1e-11
log p-value:-2.743e+01
Information Content per bp:1.720
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.2 +/- 23.3bp
Average Position of motif in Background55.2 +/- 37.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GSATTGTKWCAWCCTG
--ATTGTTTAN-----
 A C T G A T C G G T C A A C G T A C G T A T C G A G C T C A T G C G A T T G A C G C T A C G T A G T A C A G T C A C G T A T C G
A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GSATTGTKWCAWCCTG
--ATTGTTA-------
 A C T G A T C G G T C A A C G T A C G T A T C G A G C T C A T G C G A T T G A C G C T A C G T A G T A C A G T C A C G T A T C G
A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GSATTGTKWCAWCCTG
--ATTGTT--------
 A C T G A T C G G T C A A C G T A C G T A T C G A G C T C A T G C G A T T G A C G C T A C G T A G T A C A G T C A C G T A T C G
A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GSATTGTKWCAWCCTG
NNNCCATTGTGTNAN----
 A C G T A C G T A C G T A C T G A T C G G T C A A C G T A C G T A T C G A G C T C A T G C G A T T G A C G C T A C G T A G T A C A G T C A C G T A T C G
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GSATTGTKWCAWCCTG
CCATTGTTNY------
 A C T G A T C G G T C A A C G T A C G T A T C G A G C T C A T G C G A T T G A C G C T A C G T A G T A C A G T C A C G T A T C G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GSATTGTKWCAWCCTG
-CTTTGT---------
 A C T G A T C G G T C A A C G T A C G T A T C G A G C T C A T G C G A T T G A C G C T A C G T A G T A C A G T C A C G T A T C G
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GSATTGTKWCAWCCTG
CCWTTGTYYB------
 A C T G A T C G G T C A A C G T A C G T A T C G A G C T C A T G C G A T T G A C G C T A C G T A G T A C A G T C A C G T A T C G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GSATTGTKWCAWCCTG
CTCATTGTC--------
 A C G T A C T G A T C G G T C A A C G T A C G T A T C G A G C T C A T G C G A T T G A C G C T A C G T A G T A C A G T C A C G T A T C G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GSATTGTKWCAWCCTG
CCATTGTTYB------
 A C T G A T C G G T C A A C G T A C G T A T C G A G C T C A T G C G A T T G A C G C T A C G T A G T A C A G T C A C G T A T C G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GSATTGTKWCAWCCTG
TTCAATTGTTCTAAAA--
 A C G T A C G T A C T G A T C G G T C A A C G T A C G T A T C G A G C T C A T G C G A T T G A C G C T A C G T A G T A C A G T C A C G T A T C G
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T A C G T