Information for 11-CCTTAAAAGCAATCCA (Motif 21)

A T G C T A G C A C G T A G C T G C T A G T C A C G T A C G T A C T A G G T A C C G T A C T G A C G A T A T G C G T A C C G T A
Reverse Opposite:
A C G T C A T G A T C G C G T A A G C T A C G T A C T G A G T C A C G T A C G T A C G T C A G T C T G A C G T A A T C G A T C G
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.798
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.2 +/- 28.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAAAAGCAATCCA
GNCTATAAAAGG------
 A C G T A C G T A T G C T A G C A C G T A G C T G C T A G T C A C G T A C G T A C T A G G T A C C G T A C T G A C G A T A T G C G T A C C G T A
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCTTAAAAGCAATCCA---
---AAAAACCAATTAAGAA
 A T G C T A G C A C G T A G C T G C T A G T C A C G T A C G T A C T A G G T A C C G T A C T G A C G A T A T G C G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCTTAAAAGCAATCCA-
GTTAAAAAAAAAAATTA
 A T G C T A G C A C G T A G C T G C T A G T C A C G T A C G T A C T A G G T A C C G T A C T G A C G A T A T G C G T A C C G T A A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAAAAGCAATCCA--
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A T G C T A G C A C G T A G C T G C T A G T C A C G T A C G T A C T A G G T A C C G T A C T G A C G A T A T G C G T A C C G T A A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

Hmx2/MA0897.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCTTAAAAGCAATCCA-----
----ACAAGCAATTAAAGAAT
 A T G C T A G C A C G T A G C T G C T A G T C A C G T A C G T A C T A G G T A C C G T A C T G A C G A T A T G C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCTTAAAAGCAATCCA-----
----ACAAGCAATTAAAGAAT
 A T G C T A G C A C G T A G C T G C T A G T C A C G T A C G T A C T A G G T A C C G T A C T G A C G A T A T G C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAAAAGCAATCCA--
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A T G C T A G C A C G T A G C T G C T A G T C A C G T A C G T A C T A G G T A C C G T A C T G A C G A T A T G C G T A C C G T A A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCTTAAAAGCAATCCA---
--TNNAGAACAATANATNN
 A T G C T A G C A C G T A G C T G C T A G T C A C G T A C G T A C T A G G T A C C G T A C T G A C G A T A T G C G T A C C G T A A C G T A C G T A C G T
A C G T A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0116.1_Elf3_2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCTTAAAAGCAATCCA-
GTTCAAAAAAAAAATTC
 A T G C T A G C A C G T A G C T G C T A G T C A C G T A C G T A C T A G G T A C C G T A C T G A C G A T A T G C G T A C C G T A A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

BCL6B/MA0731.1/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------CCTTAAAAGCAATCCA
TGAATTCCTAGAAAGCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A G C A C G T A G C T G C T A G T C A C G T A C G T A C T A G G T A C C G T A C T G A C G A T A T G C G T A C C G T A
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A A C G T A C G T A C G T A C G T A C G T