Information for 14-TTACTTCTGCCAC (Motif 19)

A C G T A C G T C T G A A T G C A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A A T C G A G C T G T C A C G T A
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets22.5 +/- 12.8bp
Average Position of motif in Background63.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTACTTCTGCCAC--
---TGTCTGDCACCT
 A C G T A C G T C T G A A T G C A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTACTTCTGCCAC-
TGACCTTTGCCCCA
 A C G T A C G T C T G A A T G C A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TTACTTCTGCCAC-
------TTGCCAAG
 A C G T A C G T C T G A A T G C A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

ETV6/MA0645.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTACTTCTGCCAC
-CACTTCCGCT--
 A C G T A C G T C T G A A T G C A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C
A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTACTTCTGCCAC
TGACACCTGTCA-
 A C G T A C G T C T G A A T G C A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTACTTCTGCCAC
TGACAGCTGTCA-
 A C G T A C G T C T G A A T G C A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TTACTTCTGCCAC--
--CTGTCTGTCACCT
 A C G T A C G T C T G A A T G C A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C A C G T A C G T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PKNOX2/MA0783.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTACTTCTGCCAC
TGACACCTGTCA-
 A C G T A C G T C T G A A T G C A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTACTTCTGCCAC
TGACAGCTGTCA-
 A C G T A C G T C T G A A T G C A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TTACTTCTGCCAC
-------TGCCAA
 A C G T A C G T C T G A A T G C A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A