Information for 11-CTCTGAAGAGTAT (Motif 16)

G T A C A G C T A G T C A C G T A C T G C G T A C G T A A T C G C G T A T C A G C G A T G T C A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C A C G T A T G C A C G T A C G T A G T C C G T A A C T G C T G A A C T G
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.878
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.2 +/- 29.4bp
Average Position of motif in Background46.7 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCTGAAGAGTAT
---NGAAGC----
 G T A C A G C T A G T C A C G T A C T G C G T A C G T A A T C G C G T A T C A G C G A T G T C A A C G T
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTCTGAAGAGTAT---
-----AAGGATATNTN
 G T A C A G C T A G T C A C G T A C T G C G T A C G T A A T C G C G T A T C A G C G A T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGAAGAGTAT------
NNCCTGNAAAAAAAAAAAAA
 A C G T G T A C A G C T A G T C A C G T A C T G C G T A C G T A A T C G C G T A T C A G C G A T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PB0108.1_Atf1_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCTGAAGAGTAT-
GAATGACGAATAAC
 G T A C A G C T A G T C A C G T A C T G C G T A C G T A A T C G C G T A T C A G C G A T G T C A A C G T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGAAGAGTAT------
NNCCTGNAAAAAAAAAAAAA
 A C G T G T A C A G C T A G T C A C G T A C T G C G T A C G T A A T C G C G T A T C A G C G A T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTCTGAAGAGTAT--
ATTTGCATACAATGG
 G T A C A G C T A G T C A C G T A C T G C G T A C G T A A T C G C G T A T C A G C G A T G T C A A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CTCTGAAGAGTAT
ANCCGGAAGT----
 A C G T G T A C A G C T A G T C A C G T A C T G C G T A C G T A A T C G C G T A T C A G C G A T G T C A A C G T
C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T A C G T A C G T A C G T A C G T

ELF4/MA0641.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CTCTGAAGAGTAT
AACCCGGAAGTG---
 A C G T A C G T G T A C A G C T A G T C A C G T A C T G C G T A C G T A A T C G C G T A T C A G C G A T G T C A A C G T
C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CTCTGAAGAGTAT
--CTYRAGTGSY-
 G T A C A G C T A G T C A C G T A C T G C G T A C G T A A T C G C G T A T C A G C G A T G T C A A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTCTGAAGAGTAT
ACCGGAAG-----
 G T A C A G C T A G T C A C G T A C T G C G T A C G T A A T C G C G T A T C A G C G A T G T C A A C G T
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T