Information for 10-AACGGCTTGAGTA (Motif 12)

G T C A G T C A A G T C A C T G A C T G G T A C A C G T A C G T A C T G C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A G T A C A C G T A G T C G T C A G T C A A C T G G T A C A G T C C T A G A C G T A C G T
p-value:1e-9
log p-value:-2.219e+01
Information Content per bp:1.920
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.6 +/- 14.8bp
Average Position of motif in Background19.2 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AACGGCTTGAGTA---
-----CTTGAGTGGCT
 G T C A G T C A A G T C A C T G A C T G G T A C A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AACGGCTTGAGTA--
-----CTYRAGTGSY
 G T C A G T C A A G T C A C T G A C T G G T A C A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AACGGCTTGAGTA
NHAACBGYYV-----
 A C G T A C G T G T C A G T C A A G T C A C T G A C T G G T A C A C G T A C G T A C T G C G T A A C T G A C G T C G T A
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T A C G T A C G T A C G T A C G T

PH0016.1_Cux1_1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AACGGCTTGAGTA-----
-ACCGGTTGATCACCTGA
 G T C A G T C A A G T C A C T G A C T G G T A C A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

PB0045.1_Myb_1/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----AACGGCTTGAGTA
NNNNTAACGGTTNNNAN-
 A C G T A C G T A C G T A C G T A C G T G T C A G T C A A G T C A C T G A C T G G T A C A C G T A C G T A C T G C G T A A C T G A C G T C G T A
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AACGGCTTGAGTA
-ATGGGGTGAT--
 G T C A G T C A A G T C A C T G A C T G G T A C A C G T A C G T A C T G C G T A A C T G A C G T C G T A
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T

PB0046.1_Mybl1_1/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----AACGGCTTGAGTA
NNANTAACGGTTNNNAN-
 A C G T A C G T A C G T A C G T A C G T G T C A G T C A A G T C A C T G A C T G G T A C A C G T A C G T A C T G C G T A A C T G A C G T C G T A
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AACGGCTTGAGTA---
------TTAAGTGCTT
 G T C A G T C A A G T C A C T G A C T G G T A C A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AACGGCTTGAGTA--
ATAACCACTTGAAAATT
 A C G T A C G T G T C A G T C A A G T C A C T G A C T G G T A C A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:forward strand
Alignment:AACGGCTTGAGTA---
------TTRAGTGSYK
 G T C A G T C A A G T C A C T G A C T G G T A C A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T