Information for 16-GRHCAGGGCCCWGTGA (Motif 33)

C T A G C T G A G A T C A G T C C G T A A C T G A C T G A C T G A G T C A G T C T A G C C G T A A C T G A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A G T C C G A T A T C G C T A G T C A G A G T C A G T C A G T C C G A T A C T G C A T G A G C T A G T C
p-value:1e-4
log p-value:-1.084e+01
Information Content per bp:1.771
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.6 +/- 23.3bp
Average Position of motif in Background49.4 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GRHCAGGGCCCWGTGA-
-------RTCATGTGAC
 C T A G C T G A G A T C A G T C C G T A A C T G A C T G A C T G A G T C A G T C T A G C C G T A A C T G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GRHCAGGGCCCWGTGA--
-------GTCATGTGACC
 C T A G C T G A G A T C A G T C C G T A A C T G A C T G A C T G A G T C A G T C T A G C C G T A A C T G A C G T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GRHCAGGGCCCWGTGA---
----AGGNCANNGTGACCT
 C T A G C T G A G A T C A G T C C G T A A C T G A C T G A C T G A G T C A G T C T A G C C G T A A C T G A C G T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

E-box(bHLH)/Promoter/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GRHCAGGGCCCWGTGA
----CCGGTCACGTGA
 C T A G C T G A G A T C A G T C C G T A A C T G A C T G A C T G A G T C A G T C T A G C C G T A A C T G A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GRHCAGGGCCCWGTGA--
---NAGGTCACNNTGACC
 C T A G C T G A G A T C A G T C C G T A A C T G A C T G A C T G A G T C A G T C T A G C C G T A A C T G A C G T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GRHCAGGGCCCWGTGA
AGGTCAAGGTCA-----
 A C G T C T A G C T G A G A T C A G T C C G T A A C T G A C T G A C T G A G T C A G T C T A G C C G T A A C T G A C G T A C T G C T G A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GRHCAGGGCCCWGTGA-
-----BRGTCACGTGAC
 C T A G C T G A G A T C A G T C C G T A A C T G A C T G A C T G A G T C A G T C T A G C C G T A A C T G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C

ESR1/MA0112.3/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GRHCAGGGCCCWGTGA----
---CAGGTCACCGTGACCTT
 C T A G C T G A G A T C A G T C C G T A A C T G A C T G A C T G A G T C A G T C T A G C C G T A A C T G A C G T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GRHCAGGGCCCWGTGA
------GGTCACGTGA
 C T A G C T G A G A T C A G T C C G T A A C T G A C T G A C T G A G T C A G T C T A G C C G T A A C T G A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

USF1/MA0093.2/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GRHCAGGGCCCWGTGA--
-------GCCACGTGACC
 C T A G C T G A G A T C A G T C C G T A A C T G A C T G A C T G A G T C A G T C T A G C C G T A A C T G A C G T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C