Information for 1-GGTTCRAKWMCCG (Motif 2)

A C T G A C T G A C G T A C G T A G T C C T A G C G T A A C T G C G T A G T A C A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C T G C G A T G T A C A C G T A G T C A C T G C G T A C G T A A G T C G T A C
p-value:1e-12
log p-value:-2.956e+01
Information Content per bp:1.877
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 21.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GGTTCRAKWMCCG
BCNGGTTCTAGANCN-
 A C G T A C G T A C G T A C T G A C T G A C G T A C G T A G T C C T A G C G T A A C T G C G T A G T A C A G T C A G T C A C T G
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGTTCRAKWMCCG
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A G T C C T A G C G T A A C T G C G T A G T A C A G T C A G T C A C T G
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTTCRAKWMCCG
GGTTAGAGACCT-
 A C T G A C T G A C G T A C G T A G T C C T A G C G T A A C T G C G T A G T A C A G T C A G T C A C T G
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGTTCRAKWMCCG
GGCTCYAKCAYC-
 A C T G A C T G A C G T A C G T A G T C C T A G C G T A A C T G C G T A G T A C A G T C A G T C A C T G
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GGTTCRAKWMCCG
CTCCAGGGGTCAATTGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A G T C C T A G C G T A A C T G C G T A G T A C A G T C A G T C A C T G
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGTTCRAKWMCCG
DGATCRATAN---
 A C T G A C T G A C G T A C G T A G T C C T A G C G T A A C T G C G T A G T A C A G T C A G T C A C T G
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGTTCRAKWMCCG--
ATGGTTCAATAATTTTG
 A C G T A C G T A C T G A C T G A C G T A C G T A G T C C T A G C G T A A C T G C G T A G T A C A G T C A G T C A C T G A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGTTCRAKWMCCG
TNTGGTTTCGATACN--
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A G T C C T A G C G T A A C T G C G T A G T A C A G T C A G T C A C T G
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGTTCRAKWMCCG
TCAGTTTCATTTTCC-
 A C G T A C G T A C G T A C T G A C T G A C G T A C G T A G T C C T A G C G T A A C T G C G T A G T A C A G T C A G T C A C T G
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GGTTCRAKWMCCG
AGAGCGGGGTCAAGTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A G T C C T A G C G T A A C T G C G T A G T A C A G T C A G T C A C T G
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T A C G T A C G T