Information for 11-RTCAGTGTGATCACAC (Motif 18)

T C A G C G A T T A G C C G T A A C T G A C G T A C T G A C G T A C T G G T C A C A G T T A G C G T C A A T G C C G T A A G T C
Reverse Opposite:
C T A G C G A T A T C G A C G T A C T G G T C A A C G T A G T C C G T A A G T C G T C A A G T C A C G T A C T G C G T A A G T C
p-value:1e-7
log p-value:-1.810e+01
Information Content per bp:1.762
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.3 +/- 27.3bp
Average Position of motif in Background43.4 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:RTCAGTGTGATCACAC--
-TACATGTGCACATAAAA
 T C A G C G A T T A G C C G T A A C T G A C G T A C T G A C G T A C T G G T C A C A G T T A G C G T C A A T G C C G T A A G T C A C G T A C G T
A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

EOMES/MA0800.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RTCAGTGTGATCACAC
-AAGGTGTGAAAAT--
 T C A G C G A T T A G C C G T A A C T G A C G T A C T G A C G T A C T G G T C A C A G T T A G C G T C A A T G C C G T A A G T C
A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:RTCAGTGTGATCACAC
--CAGTGTGGTCGC--
 T C A G C G A T T A G C C G T A A C T G A C G T A C T G A C G T A C T G G T C A C A G T T A G C G T C A A T G C C G T A A G T C
A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:RTCAGTGTGATCACAC
--AGGTGTGA------
 T C A G C G A T T A G C C G T A A C T G A C G T A C T G A C G T A C T G G T C A C A G T T A G C G T C A A T G C C G T A A G T C
A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:RTCAGTGTGATCACAC--
-CAGATGTGCACATACGT
 T C A G C G A T T A G C C G T A A C T G A C G T A C T G A C G T A C T G G T C A C A G T T A G C G T C A A T G C C G T A A G T C A C G T A C G T
A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:RTCAGTGTGATCACAC
--AGGTGTGA------
 T C A G C G A T T A G C C G T A A C T G A C G T A C T G A C G T A C T G G T C A C A G T T A G C G T C A A T G C C G T A A G T C
A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RTCAGTGTGATCACAC
-AAGGTGTGAA-----
 T C A G C G A T T A G C C G T A A C T G A C G T A C T G A C G T A C T G G T C A C A G T T A G C G T C A A T G C C G T A A G T C
A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RTCAGTGTGATCACAC
-TAGGTGTGAAG----
 T C A G C G A T T A G C C G T A A C T G A C G T A C T G A C G T A C T G G T C A C A G T T A G C G T C A A T G C C G T A A G T C
A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:RTCAGTGTGATCACAC
--AGGTGTGA------
 T C A G C G A T T A G C C G T A A C T G A C G T A C T G A C G T A C T G G T C A C A G T T A G C G T C A A T G C C G T A A G T C
A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:RTCAGTGTGATCACAC
--AGGTGTGA------
 T C A G C G A T T A G C C G T A A C T G A C G T A C T G A C G T A C T G G T C A C A G T T A G C G T C A A T G C C G T A A G T C
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T