p-value: | 1e-9 |
log p-value: | -2.085e+01 |
Information Content per bp: | 1.758 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 2.19% |
Number of Background Sequences with motif | 25.2 |
Percentage of Background Sequences with motif | 0.06% |
Average Position of motif in Targets | 60.5 +/- 25.2bp |
Average Position of motif in Background | 60.6 +/- 21.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.43 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORA/MA0071.1/Jaspar
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTGARTAGT TGACCTTGAT--- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTGARTAGT TGACCTYA----- |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTGARTAGT TGACCTARTT--- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTGARTAGT TGACCT------- |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTGARTAGT TTGACCTANTTATN |
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PH0058.1_Hoxb3/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGACCTGARTAGT---- TGAGCTAATTAGTTGGA |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGACCTGARTAGT NTGACCTTGA---- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTGARTAGT GTGACCTT------ |
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Esrrg/MA0643.1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTGARTAGT ATGACCTTGA---- |
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ZEB1/MA0103.2/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGACCTGARTAGT CCTCACCTG------ |
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