Information for 17-YHTTTTTTTTTTT (Motif 20)

G A C T G C A T G A C T G A C T G A C T A G C T A G C T C A G T A C G T A C G T A G C T A G C T A G C T
Reverse Opposite:
T C G A T C G A T C G A T C G A T G C A G T C A T C G A T C G A C T G A C T G A C T G A C G T A C T G A
p-value:1e-2
log p-value:-5.853e+00
Information Content per bp:1.547
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif228.5
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets39.1 +/- 28.6bp
Average Position of motif in Background47.6 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-YHTTTTTTTTTTT---
NNNNTTTTTTTTTNAAC
 A C G T G A C T G C A T G A C T G A C T G A C T A G C T A G C T C A G T A C G T A C G T A G C T A G C T A G C T A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:YHTTTTTTTTTTT----
---TTTTTTTTCNNGTN
 G A C T G C A T G A C T G A C T G A C T A G C T A G C T C A G T A C G T A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-YHTTTTTTTTTTT-
NTNTTGTTGTTTGTN
 A C G T G A C T G C A T G A C T G A C T G A C T A G C T A G C T C A G T A C G T A C G T A G C T A G C T A G C T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-YHTTTTTTTTTTT---
GNATTTTTTTTTTGANC
 A C G T G A C T G C A T G A C T G A C T G A C T A G C T A G C T C A G T A C G T A C G T A G C T A G C T A G C T A C G T A C G T A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:YHTTTTTTTTTTT----
--NNTTTNTTTTNGNNN
 G A C T G C A T G A C T G A C T G A C T A G C T A G C T C A G T A C G T A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:YHTTTTTTTTTTT-----
---CTTTGTTTACTTTTN
 G A C T G C A T G A C T G A C T G A C T A G C T A G C T C A G T A C G T A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:YHTTTTTTTTTTT
GAATGTTTGTTT-
 G A C T G C A T G A C T G A C T G A C T A G C T A G C T C A G T A C G T A C G T A G C T A G C T A G C T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:YHTTTTTTTTTTT-----
---TTCTATTTTTAGNNN
 G A C T G C A T G A C T G A C T G A C T A G C T A G C T C A G T A C G T A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:YHTTTTTTTTTTT-
NNGTANTGTTTTNC
 G A C T G C A T G A C T G A C T G A C T A G C T A G C T C A G T A C G T A C G T A G C T A G C T A G C T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:YHTTTTTTTTTTT
-AGTTTCAKTTTC
 G A C T G C A T G A C T G A C T G A C T A G C T A G C T C A G T A C G T A C G T A G C T A G C T A G C T
A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C