Information for 11-GCAAGACCAGCCC (Motif 13)

A C T G A G T C T C G A C G T A A C T G G T C A A G T C A G T C C G T A A C T G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G G T A C A C G T A C T G A C T G A C G T A G T C A C G T A G C T A C T G A G T C
p-value:1e-10
log p-value:-2.428e+01
Information Content per bp:1.937
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 18.6bp
Average Position of motif in Background45.9 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCAAGACCAGCCC---
--NAGCCCCGCCCCCN
 A C T G A G T C T C G A C G T A A C T G G T C A A G T C A G T C C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCAAGACCAGCCC-
TCCCAGMCRAGCCCC
 A C G T A C T G A G T C T C G A C G T A A C T G G T C A A G T C A G T C C G T A A C T G A G T C A G T C A G T C A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCAAGACCAGCCC--
---GGCCCCGCCCCC
 A C T G A G T C T C G A C G T A A C T G G T C A A G T C A G T C C G T A A C T G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCAAGACCAGCCC---
CATAAGACCACCATTAC
 A C G T A C T G A G T C T C G A C G T A A C T G G T C A A G T C A G T C C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCAAGACCAGCCC--
---GGACCACCCACG
 A C T G A G T C T C G A C G T A A C T G G T C A A G T C A G T C C G T A A C T G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

SP4/MA0685.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCAAGACCAGCCC-----
-TAAGCCACGCCCCCTTT
 A C T G A G T C T C G A C G T A A C T G G T C A A G T C A G T C C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCAAGACCAGCCC
AAGTTCAAGGTCAGC--
 A C G T A C G T A C G T A C G T A C T G A G T C T C G A C G T A A C T G G T C A A G T C A G T C C G T A A C T G A G T C A G T C A G T C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCAAGACCAGCCC------
----GCCCCGCCCCCTCCC
 A C T G A G T C T C G A C G T A A C T G G T C A A G T C A G T C C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCAAGACCAGCCC-
----GCCMCRCCCH
 A C T G A G T C T C G A C G T A A C T G G T C A A G T C A G T C C G T A A C T G A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCAAGACCAGCCC
-CAAGGHCANV--
 A C T G A G T C T C G A C G T A A C T G G T C A A G T C A G T C C G T A A C T G A G T C A G T C A G T C
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T