Information for 1-GHCAAACHGGTTT (Motif 1)

T A C G G C A T G T A C C G T A T C G A C T G A A G T C G T A C C T A G A C T G G A C T G A C T A G C T
Reverse Opposite:
T C G A C G T A C G T A A G T C G A T C C A T G A C T G G A C T A G C T G C A T C A T G C G T A A T G C
p-value:1e-138
log p-value:-3.179e+02
Information Content per bp:1.565
Number of Target Sequences with motif237.0
Percentage of Target Sequences with motif28.25%
Number of Background Sequences with motif1681.4
Percentage of Background Sequences with motif3.53%
Average Position of motif in Targets50.9 +/- 19.0bp
Average Position of motif in Background49.2 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:GHCAAACHGGTTT-
--NAAACCGGTTTT
 T A C G G C A T G T A C C G T A T C G A C T G A A G T C G T A C C T A G A C T G G A C T G A C T A G C T A C G T
A C G T A C G T G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.86
Offset:3
Orientation:reverse strand
Alignment:GHCAAACHGGTTT
---AAACCGGTTT
 T A C G G C A T G T A C C G T A T C G A C T G A A G T C G T A C C T A G A C T G G A C T G A C T A G C T
A C G T A C G T A C G T C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:3
Score:0.82
Offset:-7
Orientation:reverse strand
Alignment:-------GHCAAACHGGTTT
VAAACYKGTHWAACMRGTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G C A T G T A C C G T A T C G A C T G A A G T C G T A C C T A G A C T G G A C T G A C T A G C T
T C G A C T G A C T G A C G T A T A G C G A C T C A T G T C A G G C A T G C A T C G T A C T G A C T G A A G T C G T A C C T A G A T C G G A C T G A C T A G C T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GHCAAACHGGTTT
----AACAGGTGT
 T A C G G C A T G T A C C G T A T C G A C T G A A G T C G T A C C T A G A C T G G A C T G A C T A G C T
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GHCAAACHGGTTT---
ANTNNTACATGTANNTN
 A C G T T A C G G C A T G T A C C G T A T C G A C T G A A G T C G T A C C T A G A C T G G A C T G A C T A G C T A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GHCAAACHGGTTT---------
--NAAACCGGTTNNAACCGGTT
 T A C G G C A T G T A C C G T A T C G A C T G A A G T C G T A C C T A G A C T G G A C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T

PH0085.1_Irx4/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GHCAAACHGGTTT---
NNTTTTACATGTANNNT
 A C G T T A C G G C A T G T A C C G T A T C G A C T G A A G T C G T A C C T A G A C T G G A C T G A C T A G C T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GHCAAACHGGTTT--
-----VCAGGTRDRY
 T A C G G C A T G T A C C G T A T C G A C T G A A G T C G T A C C T A G A C T G G A C T G A C T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GHCAAACHGGTTT---
ANTATTACATGTANNNN
 A C G T T A C G G C A T G T A C C G T A T C G A C T G A A G T C G T A C C T A G A C T G G A C T G A C T A G C T A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GHCAAACHGGTTT-----
-GAAAACTAGTTAACATC
 T A C G G C A T G T A C C G T A T C G A C T G A A G T C G T A C C T A G A C T G G A C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C