p-value: | 1e-11 |
log p-value: | -2.757e+01 |
Information Content per bp: | 1.816 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.89% |
Number of Background Sequences with motif | 4.3 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 49.1 +/- 26.7bp |
Average Position of motif in Background | 56.0 +/- 29.1bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CGTCTGCTATAAC VBSYGTCTGG------ |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CGTCTGCTATAAC CTGTCTGG------ |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CGTCTGCTATAAC GGTCTGGCAT--- |
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NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CGTCTGCTATAAC ACCATCTGTT----- |
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ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CGTCTGCTATAAC--- -GTCWGCTGTYYCTCT |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----CGTCTGCTATAAC NNTNNTGTCTGGNNTNG- |
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NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CGTCTGCTATAAC GCCATCTGTT----- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CGTCTGCTATAAC TWGTCTGV------ |
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Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer
Match Rank: | 9 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CGTCTGCTATAAC RCCATMTGTT----- |
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PH0158.1_Rhox11_2/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CGTCTGCTATAAC---- AGGACGCTGTAAAGGGA |
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