Information for 5-AAAAACAAGT (Motif 3)

G T C A C T G A T G C A G C T A C G T A A G T C C G T A C T G A T A C G G C A T
Reverse Opposite:
C G T A A T G C A G C T C G A T A C T G G C A T C G A T A C G T A G C T A C G T
p-value:1e-19
log p-value:-4.583e+01
Information Content per bp:1.829
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.06%
Number of Background Sequences with motif354.0
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets56.3 +/- 24.4bp
Average Position of motif in Background47.5 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AAAAACAAGT-
AACAAACAACAAGAG
 A C G T A C G T A C G T A C G T G T C A C T G A T G C A G C T A C G T A A G T C C G T A C T G A T A C G G C A T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

GRHL1/MA0647.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAAAACAAGT---
-AAAACCGGTTTT
 G T C A C T G A T G C A G C T A C G T A A G T C C G T A C T G A T A C G G C A T A C G T A C G T A C G T
A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

Foxj2/MA0614.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAAACAAGT
GTAAACAA--
 G T C A C T G A T G C A G C T A C G T A A G T C C G T A C T G A T A C G G C A T
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAAAACAAGT--
AAAAATAACAAACGG
 A C G T A C G T A C G T G T C A C T G A T G C A G C T A C G T A A G T C C G T A C T G A T A C G G C A T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAAAACAAGT--
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A T G C A G C T A C G T A A G T C C G T A C T G A T A C G G C A T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AAAAACAAGT-
NTTNAGAACAATTA
 A C G T A C G T A C G T G T C A C T G A T G C A G C T A C G T A A G T C C G T A C T G A T A C G G C A T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0066.1_Sox17_1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAAAACAAGT-----
ATAAACAATTAAACA
 G T C A C T G A T G C A G C T A C G T A A G T C C G T A C T G A T A C G G C A T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

Foxo1/MA0480.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAAAACAAGT
TGTAAACAGGA
 A C G T G T C A C T G A T G C A G C T A C G T A A G T C C G T A C T G A T A C G G C A T
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

PH0086.1_Irx5/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAAAACAAGT------
AATATACATGTAAAATT
 A C G T G T C A C T G A T G C A G C T A C G T A A G T C C G T A C T G A T A C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAAAACAAGT
WWTRTAAACAVG-
 A C G T A C G T A C G T G T C A C T G A T G C A G C T A C G T A A G T C C G T A C T G A T A C G G C A T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G A C G T