Information for 12-ACGCGGTAGA (Motif 18)

C G T A T A G C C T A G T A G C A T C G C T A G A C G T C T G A A C T G G C T A
Reverse Opposite:
C G A T A G T C A G C T T G C A A G T C T A G C A T C G A G T C A T C G A C G T
p-value:1e-4
log p-value:-9.577e+00
Information Content per bp:1.724
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.06%
Number of Background Sequences with motif1231.4
Percentage of Background Sequences with motif2.60%
Average Position of motif in Targets53.4 +/- 22.9bp
Average Position of motif in Background49.6 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACGCGGTAGA-
GGGCGGGAAGG
 C G T A T A G C C T A G T A G C A T C G C T A G A C G T C T G A A C T G G C T A A C G T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACGCGGTAGA---
AGGTGNCAGACAG
 C G T A T A G C C T A G T A G C A T C G C T A G A C G T C T G A A C T G G C T A A C G T A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACGCGGTAGA-
-GGCGGGAARN
 C G T A T A G C C T A G T A G C A T C G C T A G A C G T C T G A A C T G G C T A A C G T
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACGCGGTAGA
ACVAGGAAGT
 C G T A T A G C C T A G T A G C A T C G C T A G A C G T C T G A A C T G G C T A
G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACGCGGTAGA--
AGGTGHCAGACA
 C G T A T A G C C T A G T A G C A T C G C T A G A C G T C T G A A C T G G C T A A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACGCGGTAGA-
GGGCGGGAAGG
 C G T A T A G C C T A G T A G C A T C G C T A G A C G T C T G A A C T G G C T A A C G T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACGCGGTAGA-
-GGCGGGAAAH
 C G T A T A G C C T A G T A G C A T C G C T A G A C G T C T G A A C T G G C T A A C G T
A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

SPIC/MA0687.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACGCGGTAGA-
AAAAAGAGGAAGTA
 A C G T A C G T A C G T C G T A T A G C C T A G T A G C A T C G C T A G A C G T C T G A A C T G G C T A A C G T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACGCGGTAGA--
TGGCGGGAAAHB
 C G T A T A G C C T A G T A G C A T C G C T A G A C G T C T G A A C T G G C T A A C G T A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

ELF5/MA0136.2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACGCGGTAGA-
ACCCGGAAGTA
 C G T A T A G C C T A G T A G C A T C G C T A G A C G T C T G A A C T G G C T A A C G T
C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A