Information for 1-AAACCKGTYDRRCMRG (Motif 1)

C T G A C T G A C T G A A T G C G A T C C A T G A C T G G C A T G A C T C G A T C T A G C T G A A T G C G T C A C T A G A T C G
Reverse Opposite:
T A G C G A T C C A G T A T C G G A C T G A T C G C T A C T G A C G T A A G T C G T A C C T A G A T C G G A C T G A C T G A C T
p-value:1e-208
log p-value:-4.796e+02
Information Content per bp:1.535
Number of Target Sequences with motif299.0
Percentage of Target Sequences with motif37.85%
Number of Background Sequences with motif1781.9
Percentage of Background Sequences with motif3.76%
Average Position of motif in Targets51.1 +/- 17.6bp
Average Position of motif in Background50.6 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:forward strand
Alignment:AAACCKGTYDRRCMRG----
AAACYKGTTWDACMRGTTTB
 C T G A C T G A C T G A A T G C G A T C C A T G A C T G G C A T G A C T C G A T C T A G C T G A A T G C G T C A C T A G A T C G A C G T A C G T A C G T A C G T
C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAACCKGTYDRRCMRG
AAACCGGTTT------
 C T G A C T G A C T G A A T G C G A T C C A T G A C T G G C A T G A C T C G A T C T A G C T G A A T G C G T C A C T A G A T C G
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AAACCKGTYDRRCMRG
AAAACCGGTTTT-----
 A C G T C T G A C T G A C T G A A T G C G A T C C A T G A C T G G C A T G A C T C G A T C T A G C T G A A T G C G T C A C T A G A T C G
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAACCKGTYDRRCMRG
NCACCTGTN-------
 C T G A C T G A C T G A A T G C G A T C C A T G A C T G G C A T G A C T C G A T C T A G C T G A A T G C G T C A C T A G A T C G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.54
Offset:-11
Orientation:forward strand
Alignment:-----------AAACCKGTYDRRCMRG
NAAACCGGTTNNAACCGGTT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T G A A T G C G A T C C A T G A C T G G C A T G A C T C G A T C T A G C T G A A T G C G T C A C T A G A T C G
T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AAACCKGTYDRRCMRG
AATATACATGTAAAACA--
 A C G T A C G T A C G T C T G A C T G A C T G A A T G C G A T C C A T G A C T G G C A T G A C T C G A T C T A G C T G A A T G C G T C A C T A G A T C G
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AAACCKGTYDRRCMRG
AAAATACATGTAATACT--
 A C G T A C G T A C G T C T G A C T G A C T G A A T G C G A T C C A T G A C T G G C A T G A C T C G A T C T A G C T G A A T G C G T C A C T A G A T C G
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AAACCKGTYDRRCMRG
AATATACATGTAAAATT--
 A C G T A C G T A C G T C T G A C T G A C T G A A T G C G A T C C A T G A C T G G C A T G A C T C G A T C T A G C T G A A T G C G T C A C T A G A T C G
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AAACCKGTYDRRCMRG
----BTGABTGACAGS
 C T G A C T G A C T G A A T G C G A T C C A T G A C T G G C A T G A C T C G A T C T A G C T G A A T G C G T C A C T A G A T C G
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----AAACCKGTYDRRCMRG
GANGTTAACTAGTTTNN----
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T G A A T G C G A T C C A T G A C T G G C A T G A C T C G A T C T A G C T G A A T G C G T C A C T A G A T C G
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C A C G T A C G T A C G T A C G T