Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 808)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47557)	% of Background Sequences with Motif
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-411	-9.466e+02	0.0000	287.0	35.52%	290.1	0.61%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-345	-7.965e+02	0.0000	298.0	36.88%	573.3	1.20%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-10	-2.357e+01	0.0000	199.0	24.63%	7555.9	15.78%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-9	-2.189e+01	0.0000	79.0	9.78%	2177.3	4.55%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-8	-2.048e+01	0.0000	68.0	8.42%	1803.7	3.77%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-7	-1.752e+01	0.0000	71.0	8.79%	2071.9	4.33%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-6	-1.444e+01	0.0000	121.0	14.98%	4559.2	9.52%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-5	-1.239e+01	0.0002	7.0	0.87%	37.6	0.08%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-4	-1.146e+01	0.0004	127.0	15.72%	5151.2	10.76%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-4	-1.133e+01	0.0004	294.0	36.39%	14087.3	29.42%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-4	-1.007e+01	0.0014	39.0	4.83%	1145.2	2.39%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-4	-9.867e+00	0.0016	111.0	13.74%	4529.0	9.46%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-4	-9.240e+00	0.0027	98.0	12.13%	3950.9	8.25%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-3	-8.817e+00	0.0039	21.0	2.60%	494.5	1.03%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-3	-7.963e+00	0.0084	29.0	3.59%	845.7	1.77%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-3	-7.793e+00	0.0094	182.0	22.52%	8537.7	17.83%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-3	-7.772e+00	0.0094	88.0	10.89%	3618.9	7.56%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e-3	-7.477e+00	0.0114	96.0	11.88%	4057.4	8.47%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-3	-7.397e+00	0.0117	76.0	9.41%	3064.3	6.40%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e-3	-7.286e+00	0.0125	52.0	6.44%	1916.9	4.00%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-3	-7.029e+00	0.0154	184.0	22.77%	8783.8	18.35%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e-2	-6.755e+00	0.0193	23.0	2.85%	662.8	1.38%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-2	-6.606e+00	0.0214	15.0	1.86%	356.6	0.74%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-2	-6.451e+00	0.0239	107.0	13.24%	4764.7	9.95%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-2	-6.447e+00	0.0239	24.0	2.97%	720.9	1.51%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-2	-6.433e+00	0.0239	16.0	1.98%	400.6	0.84%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-2	-6.411e+00	0.0239	30.0	3.71%	980.0	2.05%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e-2	-6.213e+00	0.0260	37.0	4.58%	1309.2	2.73%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e-2	-6.130e+00	0.0273	44.0	5.45%	1642.2	3.43%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-2	-6.102e+00	0.0273	30.0	3.71%	1001.1	2.09%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-2	-5.891e+00	0.0325	26.0	3.22%	839.9	1.75%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-2	-4.701e+00	0.1033	133.0	16.46%	6460.9	13.50%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e-1	-4.426e+00	0.1319	115.0	14.23%	5538.4	11.57%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e-1	-4.227e+00	0.1563	107.0	13.24%	5145.3	10.75%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e-1	-4.104e+00	0.1716	9.0	1.11%	227.6	0.48%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-1	-4.097e+00	0.1716	69.0	8.54%	3142.8	6.56%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-1	-3.982e+00	0.1786	6.0	0.74%	123.0	0.26%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-1	-3.982e+00	0.1786	6.0	0.74%	123.0	0.26%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e-1	-3.839e+00	0.2008	41.0	5.07%	1736.7	3.63%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e-1	-3.741e+00	0.2159	8.0	0.99%	203.7	0.43%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-1	-3.520e+00	0.2628	41.0	5.07%	1777.7	3.71%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-1	-3.444e+00	0.2768	113.0	13.99%	5642.7	11.79%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-1	-3.399e+00	0.2828	58.0	7.18%	2678.4	5.59%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-1	-3.328e+00	0.2967	18.0	2.23%	663.9	1.39%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-1	-3.296e+00	0.2997	9.0	1.11%	263.5	0.55%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e-1	-3.277e+00	0.2997	2.0	0.25%	18.9	0.04%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-1	-3.211e+00	0.3122	37.0	4.58%	1614.1	3.37%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e-1	-3.104e+00	0.3401	128.0	15.84%	6560.0	13.70%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e-1	-3.074e+00	0.3436	6.0	0.74%	152.1	0.32%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-1	-3.033e+00	0.3508	28.0	3.47%	1180.4	2.47%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-1	-2.944e+00	0.3758	77.0	9.53%	3784.2	7.90%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-1	-2.937e+00	0.3758	24.0	2.97%	992.0	2.07%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-1	-2.927e+00	0.3758	26.0	3.22%	1092.8	2.28%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-1	-2.919e+00	0.3758	181.0	22.40%	9602.6	20.06%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-1	-2.876e+00	0.3758	26.0	3.22%	1098.0	2.29%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e-1	-2.872e+00	0.3758	13.0	1.61%	466.5	0.97%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e-1	-2.849e+00	0.3758	16.0	1.98%	609.8	1.27%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-1	-2.827e+00	0.3758	6.0	0.74%	162.9	0.34%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-1	-2.816e+00	0.3758	14.0	1.73%	517.9	1.08%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-1	-2.788e+00	0.3758	4.0	0.50%	87.2	0.18%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e-1	-2.747e+00	0.3826	18.0	2.23%	715.4	1.49%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-1	-2.642e+00	0.4182	12.0	1.49%	437.1	0.91%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e-1	-2.626e+00	0.4182	35.0	4.33%	1594.8	3.33%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e-1	-2.585e+00	0.4288	24.0	2.97%	1032.1	2.16%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-1	-2.518e+00	0.4514	37.0	4.58%	1716.8	3.59%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e-1	-2.505e+00	0.4514	23.0	2.85%	991.9	2.07%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-1	-2.494e+00	0.4514	28.0	3.47%	1249.4	2.61%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e-1	-2.473e+00	0.4516	18.0	2.23%	743.4	1.55%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e-1	-2.424e+00	0.4673	11.0	1.36%	407.9	0.85%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-1	-2.411e+00	0.4673	39.0	4.83%	1840.2	3.84%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-2.399e+00	0.4673	11.0	1.36%	409.0	0.85%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e-1	-2.397e+00	0.4673	5.0	0.62%	140.6	0.29%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-1	-2.382e+00	0.4673	26.0	3.22%	1161.8	2.43%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-1	-2.355e+00	0.4673	29.0	3.59%	1321.7	2.76%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e-1	-2.345e+00	0.4673	10.0	1.24%	366.1	0.76%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-2.225e+00	0.5174	124.0	15.35%	6596.4	13.78%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-2.182e+00	0.5331	5.0	0.62%	150.7	0.31%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-2.182e+00	0.5331	3.0	0.37%	69.9	0.15%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-2.172e+00	0.5331	26.0	3.22%	1191.1	2.49%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-2.147e+00	0.5331	29.0	3.59%	1353.6	2.83%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-2.114e+00	0.5427	16.0	1.98%	682.6	1.43%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-2.098e+00	0.5445	13.0	1.61%	533.6	1.11%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-2.076e+00	0.5500	19.0	2.35%	840.7	1.76%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-2.059e+00	0.5527	22.0	2.72%	998.8	2.09%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-2.053e+00	0.5527	64.0	7.92%	3278.3	6.85%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-2.037e+00	0.5527	29.0	3.59%	1371.3	2.86%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-2.016e+00	0.5575	26.0	3.22%	1215.6	2.54%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-2.003e+00	0.5582	3.0	0.37%	75.4	0.16%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-1.943e+00	0.5862	6.0	0.74%	208.3	0.44%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-1.926e+00	0.5894	73.0	9.03%	3814.8	7.97%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-1.869e+00	0.6168	8.0	0.99%	308.2	0.64%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.853e+00	0.6205	37.0	4.58%	1837.2	3.84%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-1.836e+00	0.6240	47.0	5.82%	2390.8	4.99%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-1.801e+00	0.6393	11.0	1.36%	463.1	0.97%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.784e+00	0.6435	22.0	2.72%	1039.4	2.17%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.764e+00	0.6497	6.0	0.74%	220.3	0.46%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.708e+00	0.6800	10.0	1.24%	423.0	0.88%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-1.673e+00	0.6974	25.0	3.09%	1219.7	2.55%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-1.662e+00	0.6974	9.0	1.11%	376.1	0.79%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.658e+00	0.6974	12.0	1.49%	530.7	1.11%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-1.652e+00	0.6974	9.0	1.11%	377.5	0.79%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	-1.624e+00	0.7031	1.0	0.12%	13.6	0.03%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-1.608e+00	0.7077	22.0	2.72%	1068.8	2.23%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-1.519e+00	0.7661	20.0	2.48%	975.8	2.04%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.514e+00	0.7661	42.0	5.20%	2191.7	4.58%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-1.491e+00	0.7728	44.0	5.45%	2310.0	4.82%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.479e+00	0.7751	10.0	1.24%	447.2	0.93%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-1.450e+00	0.7907	4.0	0.50%	146.0	0.30%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-1.446e+00	0.7907	29.0	3.59%	1483.9	3.10%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-1.421e+00	0.7987	57.0	7.05%	3064.0	6.40%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-1.413e+00	0.7987	14.0	1.73%	668.4	1.40%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-1.408e+00	0.7987	26.0	3.22%	1325.9	2.77%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-1.400e+00	0.7987	7.0	0.87%	300.6	0.63%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-1.368e+00	0.8126	12.0	1.49%	567.0	1.18%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-1.343e+00	0.8259	30.0	3.71%	1562.3	3.26%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.330e+00	0.8298	69.0	8.54%	3778.2	7.89%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-1.322e+00	0.8298	31.0	3.84%	1623.0	3.39%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-1.293e+00	0.8464	1.0	0.12%	19.7	0.04%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.291e+00	0.8464	6.0	0.74%	259.4	0.54%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.288e+00	0.8464	19.0	2.35%	962.6	2.01%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-1.286e+00	0.8464	18.0	2.23%	907.0	1.89%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-1.263e+00	0.8464	42.0	5.20%	2260.9	4.72%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-1.262e+00	0.8464	27.0	3.34%	1413.7	2.95%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-1.254e+00	0.8464	101.0	12.50%	5652.7	11.81%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-1.250e+00	0.8464	1.0	0.12%	20.8	0.04%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-1.241e+00	0.8464	6.0	0.74%	264.3	0.55%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.237e+00	0.8464	7.0	0.87%	317.6	0.66%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.200e+00	0.8566	69.0	8.54%	3827.9	8.00%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-1.192e+00	0.8569	6.0	0.74%	269.4	0.56%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-1.191e+00	0.8569	29.0	3.59%	1543.3	3.22%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-1.186e+00	0.8569	13.0	1.61%	649.6	1.36%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.182e+00	0.8569	9.0	1.11%	431.7	0.90%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.173e+00	0.8569	8.0	0.99%	378.3	0.79%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-1.163e+00	0.8569	178.0	22.03%	10185.4	21.27%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-1.161e+00	0.8569	42.0	5.20%	2291.4	4.79%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.151e+00	0.8569	59.0	7.30%	3270.5	6.83%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-1.149e+00	0.8569	12.0	1.49%	600.9	1.26%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-1.139e+00	0.8569	63.0	7.80%	3505.6	7.32%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.129e+00	0.8569	4.0	0.50%	170.3	0.36%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-1.125e+00	0.8569	2.0	0.25%	69.0	0.14%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-1.116e+00	0.8569	9.0	1.11%	440.7	0.92%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-1.115e+00	0.8569	28.0	3.47%	1506.1	3.15%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.088e+00	0.8573	2.0	0.25%	71.1	0.15%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-1.070e+00	0.8668	2.0	0.25%	72.7	0.15%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-1.063e+00	0.8669	23.0	2.85%	1235.8	2.58%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-1.062e+00	0.8669	59.0	7.30%	3304.4	6.90%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-1.061e+00	0.8669	4.0	0.50%	176.0	0.37%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-1.054e+00	0.8669	89.0	11.01%	5049.2	10.55%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-1.053e+00	0.8669	7.0	0.87%	339.1	0.71%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-1.035e+00	0.8669	23.0	2.85%	1242.4	2.60%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.009e+00	0.8787	5.0	0.62%	235.8	0.49%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.008e+00	0.8787	51.0	6.31%	2862.4	5.98%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-9.954e-01	0.8793	9.0	1.11%	458.2	0.96%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-9.906e-01	0.8793	11.0	1.36%	571.8	1.19%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-9.905e-01	0.8793	6.0	0.74%	292.3	0.61%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e0	-9.867e-01	0.8793	37.0	4.58%	2060.6	4.30%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-9.764e-01	0.8793	12.0	1.49%	630.8	1.32%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-9.668e-01	0.8793	46.0	5.69%	2588.3	5.41%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-9.566e-01	0.8796	8.0	0.99%	408.6	0.85%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-9.220e-01	0.9049	7.0	0.87%	357.1	0.75%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-9.197e-01	0.9049	31.0	3.84%	1735.1	3.62%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-9.079e-01	0.9064	19.0	2.35%	1045.6	2.18%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-9.039e-01	0.9064	19.0	2.35%	1046.8	2.19%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-9.012e-01	0.9064	30.0	3.71%	1683.0	3.52%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-8.982e-01	0.9064	3.0	0.37%	137.4	0.29%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-8.827e-01	0.9071	17.0	2.10%	936.8	1.96%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-8.757e-01	0.9079	21.0	2.60%	1169.1	2.44%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-8.507e-01	0.9254	8.0	0.99%	425.9	0.89%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-8.506e-01	0.9254	1.0	0.12%	34.0	0.07%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-8.226e-01	0.9406	21.0	2.60%	1184.1	2.47%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-8.205e-01	0.9406	5.0	0.62%	258.7	0.54%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-8.139e-01	0.9406	70.0	8.66%	4059.7	8.48%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-8.132e-01	0.9406	11.0	1.36%	606.0	1.27%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-8.016e-01	0.9406	23.0	2.85%	1307.8	2.73%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-8.001e-01	0.9406	66.0	8.17%	3831.6	8.00%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-7.966e-01	0.9406	17.0	2.10%	958.1	2.00%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-7.914e-01	0.9406	5.0	0.62%	262.0	0.55%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-7.769e-01	0.9406	2.0	0.25%	92.7	0.19%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-7.678e-01	0.9437	9.0	1.11%	498.9	1.04%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-7.642e-01	0.9437	12.0	1.49%	674.4	1.41%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-7.591e-01	0.9437	7.0	0.87%	383.9	0.80%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-7.530e-01	0.9437	78.0	9.65%	4564.5	9.53%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-7.468e-01	0.9437	26.0	3.22%	1501.3	3.14%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-7.432e-01	0.9437	53.0	6.56%	3094.6	6.46%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-7.371e-01	0.9437	86.0	10.64%	5046.7	10.54%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-7.249e-01	0.9479	15.0	1.86%	860.9	1.80%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-7.245e-01	0.9479	17.0	2.10%	978.4	2.04%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-7.083e-01	0.9535	20.0	2.48%	1160.7	2.42%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-7.058e-01	0.9535	29.0	3.59%	1693.7	3.54%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-6.940e-01	0.9570	1.0	0.12%	41.9	0.09%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-6.929e-01	0.9570	42.0	5.20%	2468.2	5.16%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-6.803e-01	0.9601	26.0	3.22%	1525.1	3.19%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-6.755e-01	0.9601	4.0	0.50%	220.8	0.46%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-6.643e-01	0.9656	15.0	1.86%	877.9	1.83%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-6.585e-01	0.9663	12.0	1.49%	700.6	1.46%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-6.567e-01	0.9663	26.0	3.22%	1534.6	3.21%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-6.288e-01	0.9853	4.0	0.50%	227.1	0.47%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-6.250e-01	0.9853	3.0	0.37%	167.5	0.35%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-6.141e-01	0.9898	18.0	2.23%	1072.1	2.24%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-6.111e-01	0.9898	19.0	2.35%	1133.5	2.37%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-6.083e-01	0.9898	16.0	1.98%	954.6	1.99%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-6.052e-01	0.9898	70.0	8.66%	4181.2	8.73%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-5.973e-01	0.9898	5.0	0.62%	293.1	0.61%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-5.960e-01	0.9898	62.0	7.67%	3710.4	7.75%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-5.918e-01	0.9898	5.0	0.62%	295.0	0.62%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-5.601e-01	1.0000	128.0	15.84%	7672.9	16.03%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-5.481e-01	1.0000	8.0	0.99%	487.5	1.02%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-5.481e-01	1.0000	2.0	0.25%	115.9	0.24%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-5.481e-01	1.0000	2.0	0.25%	115.1	0.24%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-5.409e-01	1.0000	23.0	2.85%	1401.3	2.93%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-5.392e-01	1.0000	11.0	1.36%	673.1	1.41%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-5.350e-01	1.0000	3.0	0.37%	180.2	0.38%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-5.301e-01	1.0000	14.0	1.73%	859.6	1.80%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-5.214e-01	1.0000	16.0	1.98%	984.2	2.06%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-5.097e-01	1.0000	7.0	0.87%	435.5	0.91%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-4.878e-01	1.0000	17.0	2.10%	1058.4	2.21%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-4.869e-01	1.0000	2.0	0.25%	123.5	0.26%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-4.757e-01	1.0000	21.0	2.60%	1308.6	2.73%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-4.741e-01	1.0000	23.0	2.85%	1431.0	2.99%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-4.717e-01	1.0000	22.0	2.72%	1371.1	2.86%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-4.710e-01	1.0000	91.0	11.26%	5540.1	11.57%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-4.696e-01	1.0000	38.0	4.70%	2346.5	4.90%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-4.663e-01	1.0000	27.0	3.34%	1679.4	3.51%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-4.597e-01	1.0000	6.0	0.74%	385.4	0.80%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-4.589e-01	1.0000	22.0	2.72%	1377.0	2.88%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-4.496e-01	1.0000	33.0	4.08%	2054.6	4.29%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-4.460e-01	1.0000	2.0	0.25%	130.0	0.27%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-4.410e-01	1.0000	76.0	9.41%	4665.0	9.74%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-4.395e-01	1.0000	2.0	0.25%	130.1	0.27%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-4.392e-01	1.0000	43.0	5.32%	2669.1	5.57%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-4.344e-01	1.0000	27.0	3.34%	1697.0	3.54%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-4.344e-01	1.0000	151.0	18.69%	9174.9	19.16%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-4.306e-01	1.0000	9.0	1.11%	583.9	1.22%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-4.295e-01	1.0000	4.0	0.50%	264.9	0.55%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-4.285e-01	1.0000	15.0	1.86%	959.9	2.00%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-4.192e-01	1.0000	26.0	3.22%	1643.5	3.43%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-4.045e-01	1.0000	58.0	7.18%	3606.3	7.53%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-3.937e-01	1.0000	52.0	6.44%	3250.7	6.79%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-3.874e-01	1.0000	6.0	0.74%	405.3	0.85%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-3.845e-01	1.0000	21.0	2.60%	1353.7	2.83%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-3.832e-01	1.0000	3.0	0.37%	208.5	0.44%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-3.826e-01	1.0000	42.0	5.20%	2648.1	5.53%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-3.740e-01	1.0000	56.0	6.93%	3510.8	7.33%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-3.736e-01	1.0000	9.0	1.11%	603.2	1.26%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-3.663e-01	1.0000	80.0	9.90%	4976.5	10.39%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-3.647e-01	1.0000	6.0	0.74%	412.2	0.86%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-3.646e-01	1.0000	8.0	0.99%	542.1	1.13%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-3.461e-01	1.0000	13.0	1.61%	870.4	1.82%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-3.404e-01	1.0000	44.0	5.45%	2804.7	5.86%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-3.197e-01	1.0000	2.0	0.25%	152.2	0.32%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-3.068e-01	1.0000	18.0	2.23%	1209.6	2.53%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-3.056e-01	1.0000	1.0	0.12%	80.0	0.17%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-3.056e-01	1.0000	1.0	0.12%	79.1	0.17%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-3.017e-01	1.0000	33.0	4.08%	2155.3	4.50%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-2.911e-01	1.0000	5.0	0.62%	370.1	0.77%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-2.887e-01	1.0000	21.0	2.60%	1411.3	2.95%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-2.881e-01	1.0000	1.0	0.12%	82.6	0.17%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-2.813e-01	1.0000	18.0	2.23%	1225.5	2.56%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-2.768e-01	1.0000	4.0	0.50%	306.9	0.64%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-2.752e-01	1.0000	17.0	2.10%	1165.6	2.43%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-2.725e-01	1.0000	15.0	1.86%	1038.1	2.17%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-2.686e-01	1.0000	50.0	6.19%	3242.9	6.77%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-2.683e-01	1.0000	44.0	5.45%	2870.8	6.00%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-2.614e-01	1.0000	1.0	0.12%	87.5	0.18%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-2.578e-01	1.0000	22.0	2.72%	1497.5	3.13%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-2.515e-01	1.0000	43.0	5.32%	2825.5	5.90%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-2.492e-01	1.0000	3.0	0.37%	244.1	0.51%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-2.476e-01	1.0000	8.0	0.99%	592.4	1.24%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-2.435e-01	1.0000	36.0	4.46%	2395.4	5.00%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-2.430e-01	1.0000	17.0	2.10%	1187.8	2.48%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-2.341e-01	1.0000	22.0	2.72%	1516.9	3.17%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	-2.330e-01	1.0000	1.0	0.12%	93.3	0.19%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-2.279e-01	1.0000	35.0	4.33%	2348.0	4.90%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-2.194e-01	1.0000	12.0	1.49%	876.3	1.83%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-2.132e-01	1.0000	25.0	3.09%	1727.8	3.61%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-2.125e-01	1.0000	6.0	0.74%	473.7	0.99%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-2.119e-01	1.0000	1.0	0.12%	98.6	0.21%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-2.061e-01	1.0000	8.0	0.99%	615.4	1.29%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-2.055e-01	1.0000	17.0	2.10%	1216.4	2.54%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.947e-01	1.0000	8.0	0.99%	622.2	1.30%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.919e-01	1.0000	20.0	2.48%	1424.2	2.97%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-1.916e-01	1.0000	16.0	1.98%	1162.8	2.43%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-1.897e-01	1.0000	9.0	1.11%	694.7	1.45%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-1.881e-01	1.0000	5.0	0.62%	415.8	0.87%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-1.868e-01	1.0000	9.0	1.11%	697.0	1.46%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-1.861e-01	1.0000	2.0	0.25%	190.5	0.40%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-1.782e-01	1.0000	7.0	0.87%	563.6	1.18%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-1.767e-01	1.0000	11.0	1.36%	840.8	1.76%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-1.735e-01	1.0000	3.0	0.37%	274.0	0.57%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-1.728e-01	1.0000	28.0	3.47%	1963.2	4.10%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.661e-01	1.0000	2.0	0.25%	198.3	0.41%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-1.653e-01	1.0000	3.0	0.37%	278.2	0.58%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-1.626e-01	1.0000	8.0	0.99%	644.3	1.35%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.613e-01	1.0000	3.0	0.37%	280.7	0.59%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-1.604e-01	1.0000	1.0	0.12%	113.1	0.24%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-1.570e-01	1.0000	42.0	5.20%	2882.0	6.02%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-1.437e-01	1.0000	1.0	0.12%	119.6	0.25%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.408e-01	1.0000	61.0	7.55%	4111.2	8.59%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-1.354e-01	1.0000	44.0	5.45%	3044.4	6.36%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-1.343e-01	1.0000	2.0	0.25%	213.4	0.45%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-1.333e-01	1.0000	61.0	7.55%	4127.0	8.62%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-1.313e-01	1.0000	1.0	0.12%	124.2	0.26%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.273e-01	1.0000	5.0	0.62%	454.2	0.95%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-1.267e-01	1.0000	37.0	4.58%	2610.3	5.45%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.266e-01	1.0000	1.0	0.12%	126.2	0.26%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.195e-01	1.0000	10.0	1.24%	823.8	1.72%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-1.137e-01	1.0000	1.0	0.12%	132.7	0.28%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.100e-01	1.0000	2.0	0.25%	227.3	0.47%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-1.077e-01	1.0000	1.0	0.12%	135.3	0.28%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-1.049e-01	1.0000	20.0	2.48%	1529.1	3.19%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.015e-01	1.0000	13.0	1.61%	1055.6	2.20%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-1.003e-01	1.0000	154.0	19.06%	9986.6	20.86%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-9.828e-02	1.0000	9.0	1.11%	776.3	1.62%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-9.754e-02	1.0000	20.0	2.48%	1541.9	3.22%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-9.383e-02	1.0000	7.0	0.87%	635.7	1.33%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-8.858e-02	1.0000	1.0	0.12%	146.1	0.31%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-8.731e-02	1.0000	68.0	8.42%	4683.5	9.78%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-8.725e-02	1.0000	64.0	7.92%	4429.9	9.25%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-8.365e-02	1.0000	14.0	1.73%	1152.8	2.41%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-7.594e-02	1.0000	3.0	0.37%	341.4	0.71%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-7.459e-02	1.0000	22.0	2.72%	1722.0	3.60%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-6.839e-02	1.0000	7.0	0.87%	669.8	1.40%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-6.584e-02	1.0000	10.0	1.24%	897.8	1.88%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-6.159e-02	1.0000	10.0	1.24%	905.7	1.89%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-5.978e-02	1.0000	3.0	0.37%	360.5	0.75%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-5.554e-02	1.0000	12.0	1.49%	1064.6	2.22%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-4.816e-02	1.0000	9.0	1.11%	859.7	1.80%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-4.556e-02	1.0000	1.0	0.12%	184.2	0.38%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-3.742e-02	1.0000	100.0	12.38%	6941.6	14.50%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-3.630e-02	1.0000	28.0	3.47%	2251.1	4.70%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-3.630e-02	1.0000	3.0	0.37%	399.5	0.83%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-3.581e-02	1.0000	21.0	2.60%	1767.6	3.69%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-2.408e-02	1.0000	1.0	0.12%	221.3	0.46%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-1.662e-02	1.0000	57.0	7.05%	4350.9	9.09%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.409e-02	1.0000	3.0	0.37%	471.7	0.99%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-1.210e-02	1.0000	81.0	10.02%	5997.0	12.53%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.136e-02	1.0000	3.0	0.37%	487.4	1.02%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.045e-02	1.0000	8.0	0.99%	939.1	1.96%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-8.405e-03	1.0000	23.0	2.85%	2116.7	4.42%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-7.165e-03	1.0000	3.0	0.37%	521.5	1.09%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-6.249e-03	1.0000	3.0	0.37%	531.1	1.11%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-5.942e-03	1.0000	19.0	2.35%	1864.6	3.89%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-4.822e-03	1.0000	31.0	3.84%	2773.0	5.79%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-4.302e-03	1.0000	53.0	6.56%	4330.6	9.05%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-4.189e-03	1.0000	3.0	0.37%	560.3	1.17%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-3.567e-03	1.0000	5.0	0.62%	770.7	1.61%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-3.157e-03	1.0000	26.0	3.22%	2467.0	5.15%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-2.104e-03	1.0000	59.0	7.30%	4863.6	10.16%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	48.2	0.10%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	53.4	0.11%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	54.1	0.11%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	0.000e+00	1.0000	0.0	0.00%	91.4	0.19%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	23.7	0.05%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	82.5	0.17%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	0.000e+00	1.0000	0.0	0.00%	172.2	0.36%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	16.1	0.03%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	11.3	0.02%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	44.0	0.09%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	14.1	0.03%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	68.3	0.14%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	19.0	0.04%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	2.4	0.00%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	102.2	0.21%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	8.7	0.02%