Information for 5-CGCGCCGCCCTCCGGG (Motif 5)

G T A C A C T G G T A C A C T G A G T C A G T C A T C G A T G C A T G C G T A C A C G T A G T C T A G C C T A G C T A G C A T G
Reverse Opposite:
G A T C A G T C A G T C A T C G T A C G C G T A C A T G A T C G A T C G T A G C A C T G A C T G A G T C A C T G A G T C C A T G
p-value:1e-13
log p-value:-3.217e+01
Information Content per bp:1.763
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.8 +/- 21.5bp
Average Position of motif in Background56.4 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGCGCCGCCCTCCGGG
AGCGCGCC----------
 A C G T A C G T G T A C A C T G G T A C A C T G A G T C A G T C A T C G A T G C A T G C G T A C A C G T A G T C T A G C C T A G C T A G C A T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGCGCCGCCCTCCGGG
-GCTCCGCCCMCY---
 G T A C A C T G G T A C A C T G A G T C A G T C A T C G A T G C A T G C G T A C A C G T A G T C T A G C C T A G C T A G C A T G
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGCGCCGCCCTCCGGG
GGCCCCGCCCCC----
 G T A C A C T G G T A C A C T G A G T C A G T C A T C G A T G C A T G C G T A C A C G T A G T C T A G C C T A G C T A G C A T G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGCGCCGCCCTCCGGG
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T G T A C A C T G G T A C A C T G A G T C A G T C A T C G A T G C A T G C G T A C A C G T A G T C T A G C C T A G C T A G C A T G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGCGCCGCCCTCCGGG
NRGCCCCRCCCHBNN--
 A C G T G T A C A C T G G T A C A C T G A G T C A G T C A T C G A T G C A T G C G T A C A C G T A G T C T A G C C T A G C T A G C A T G
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCGCCGCCCTCCGGG
-GCCCCGCCCCC----
 G T A C A C T G G T A C A C T G A G T C A G T C A T C G A T G C A T G C G T A C A C G T A G T C T A G C C T A G C T A G C A T G
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCGCCGCCCTCCGGG
-GCCCCGCCCC-----
 G T A C A C T G G T A C A C T G A G T C A G T C A T C G A T G C A T G C G T A C A C G T A G T C T A G C C T A G C T A G C A T G
A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGCGCCGCCCTCCGGG
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T G T A C A C T G G T A C A C T G A G T C A G T C A T C G A T G C A T G C G T A C A C G T A G T C T A G C C T A G C T A G C A T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGCGCCGCCCTCCGGG
NAGCCCCGCCCCCN---
 A C G T G T A C A C T G G T A C A C T G A G T C A G T C A T C G A T G C A T G C G T A C A C G T A G T C T A G C C T A G C T A G C A T G
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGCGCCGCCCTCCGGG
-GCCCCACCCA-----
 G T A C A C T G G T A C A C T G A G T C A G T C A T C G A T G C A T G C G T A C A C G T A G T C T A G C C T A G C T A G C A T G
A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T