Information for 4-CAGGGGGAGGCAGGGT (Motif 3)

A G T C C G T A A C T G A C T G C T A G A C T G A C T G C G T A A C T G A T C G A G T C C G T A A C T G A C T G A T C G A C G T
Reverse Opposite:
C G T A A T G C G T A C G T A C A C G T A C T G A T G C A G T C A C G T A G T C A G T C A G T C G T A C A G T C A C G T A C T G
p-value:1e-21
log p-value:-4.960e+01
Information Content per bp:1.891
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.4 +/- 18.6bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGGGAGGCAGGGT
DCHCAGCAGGRGGCC----
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G C T A G A C T G A C T G C G T A A C T G A T C G A G T C C G T A A C T G A C T G A T C G A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGGGAGGCAGGGT
NNNNGGGGGAAGANGG--
 A C G T A C G T A G T C C G T A A C T G A C T G C T A G A C T G A C T G C G T A A C T G A T C G A G T C C G T A A C T G A C T G A T C G A C G T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CAGGGGGAGGCAGGGT
GCCASCAGGGGGCGCYVNNG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G C T A G A C T G A C T G C G T A A C T G A T C G A G T C C G T A A C T G A C T G A T C G A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGGGGGAGGCAGGGT
-AAGGKGRCGCAGGCA
 A G T C C G T A A C T G A C T G C T A G A C T G A C T G C G T A A C T G A T C G A G T C C G T A A C T G A C T G A T C G A C G T
A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGGGGGAGGCAGGGT
--GGGGGGGG------
 A G T C C G T A A C T G A C T G C T A G A C T G A C T G C G T A A C T G A T C G A G T C C G T A A C T G A C T G A T C G A C G T
A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGGGAGGCAGGGT
GGCGGGGGCGGGGG---
 A C G T A G T C C G T A A C T G A C T G C T A G A C T G A C T G C G T A A C T G A T C G A G T C C G T A A C T G A C T G A T C G A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGGGGGAGGCAGGGT
-DGGGYGKGGC-----
 A G T C C G T A A C T G A C T G C T A G A C T G A C T G C G T A A C T G A T C G A G T C C G T A A C T G A C T G A T C G A C G T
A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CAGGGGGAGGCAGGGT
TGTCAGGGGGCG-------
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G C T A G A C T G A C T G C G T A A C T G A T C G A G T C C G T A A C T G A C T G A T C G A C G T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGGGGGAGGCAGGGT
GGAGGGGGAA-------
 A C G T A G T C C G T A A C T G A C T G C T A G A C T G A C T G C G T A A C T G A T C G A G T C C G T A A C T G A C T G A T C G A C G T
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGGGGGAGGCAGGGT
--TGGGGA--------
 A G T C C G T A A C T G A C T G C T A G A C T G A C T G C G T A A C T G A T C G A G T C C G T A A C T G A C T G A T C G A C G T
A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T