Information for 1-TCTGCASTMCAAACTG (Motif 3)

A G C T G T A C A C G T A C T G A T G C C G T A A T G C A G C T G T C A G A T C C G T A C T G A C G T A A G T C A G C T C T A G
Reverse Opposite:
G A T C C T G A T A C G A C G T A G C T A C G T C T A G C A G T C T G A T A C G C G A T A T C G G T A C G T C A A C T G C T G A
p-value:1e-12
log p-value:-2.931e+01
Information Content per bp:1.723
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.9 +/- 26.6bp
Average Position of motif in Background47.0 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.55
Offset:9
Orientation:forward strand
Alignment:TCTGCASTMCAAACTG---
---------NHAACBGYYV
 A G C T G T A C A C G T A C T G A T G C C G T A A T G C A G C T G T C A G A T C C G T A C T G A C G T A A G T C A G C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TCTGCASTMCAAACTG------
------CGACCAACTGCCATGC
 A G C T G T A C A C G T A C T G A T G C C G T A A T G C A G C T G T C A G A T C C G T A C T G A C G T A A G T C A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.53
Offset:9
Orientation:forward strand
Alignment:TCTGCASTMCAAACTG---
---------CCAACTGCCA
 A G C T G T A C A C G T A C T G A T G C C G T A A T G C A G C T G T C A G A T C C G T A C T G A C G T A A G T C A G C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCASTMCAAACTG
ATTTGCATAACAAAG--
 A C G T A G C T G T A C A C G T A C T G A T G C C G T A A T G C A G C T G T C A G A T C C G T A C T G A C G T A A G T C A G C T C T A G
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TCTGCASTMCAAACTG-----
------CGACCAACTGCCGTG
 A G C T G T A C A C G T A C T G A T G C C G T A A T G C A G C T G T C A G A T C C G T A C T G A C G T A A G T C A G C T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:TCTGCASTMCAAACTG---
---------CCAACTGCCA
 A G C T G T A C A C G T A C T G A T G C C G T A A T G C A G C T G T C A G A T C C G T A C T G A C G T A A G T C A G C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:7
Score:0.50
Offset:11
Orientation:reverse strand
Alignment:TCTGCASTMCAAACTG---
-----------AACCGANA
 A G C T G T A C A C G T A C T G A T G C C G T A A T G C A G C T G T C A G A T C C G T A C T G A C G T A A G T C A G C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

E2F8/MA0865.1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TCTGCASTMCAAACTG
-TTTCCCGCCAAA---
 A G C T G T A C A C G T A C T G A T G C C G T A A T G C A G C T G T C A G A T C C G T A C T G A C G T A A G T C A G C T C T A G
A C G T G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TCTGCASTMCAAACTG
-----NATTCAAAT--
 A G C T G T A C A C G T A C T G A T G C C G T A A T G C A G C T G T C A G A T C C G T A C T G A C G T A A G T C A G C T C T A G
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-TCTGCASTMCAAACTG
ATTTGCATAACAATG--
 A C G T A G C T G T A C A C G T A C T G A T G C C G T A A T G C A G C T G T C A G A T C C G T A C T G A C G T A A G T C A G C T C T A G
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T A C G T