Information for 2-TCCAKTCTCCCYT (Motif 2)

A C G T A G T C A G T C C G T A A C T G C A G T G T A C A C G T A G T C A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A C T A G A C T G A C T G A C T G C G T A A C T G G C T A G T A C A C G T A C T G A C T G C G T A
p-value:1e-13
log p-value:-3.068e+01
Information Content per bp:1.916
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.5 +/- 25.0bp
Average Position of motif in Background27.4 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCCAKTCTCCCYT
NNGCACCTTTCTCC---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C A G T G T A C A C G T A G T C A G T C A G T C A G T C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCCAKTCTCCCYT----
-CCGTCTTCCCCCTCAC
 A C G T A G T C A G T C C G T A A C T G C A G T G T A C A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCCAKTCTCCCYT-------
---NTCNTCCCCTATNNGNN
 A C G T A G T C A G T C C G T A A C T G C A G T G T A C A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TCCAKTCTCCCYT
-------TCCCCA
 A C G T A G T C A G T C C G T A A C T G C A G T G T A C A C G T A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TCCAKTCTCCCYT--
-----TTCCCCCTAC
 A C G T A G T C A G T C C G T A A C T G C A G T G T A C A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TCCAKTCTCCCYT---
-TCACTTTCACTTTCN
 A C G T A G T C A G T C C G T A A C T G C A G T G T A C A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TCCAKTCTCCCYT--
CCTTCCTTCCTTCCTTCC
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C A G T G T A C A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TCCAKTCTCCCYT
NCCATTGTTY---
 A C G T A G T C A G T C C G T A A C T G C A G T G T A C A C G T A G T C A G T C A G T C A G T C A C G T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCCAKTCTCCCYT
NCCATTGTTC---
 A C G T A G T C A G T C C G T A A C T G C A G T G T A C A C G T A G T C A G T C A G T C A G T C A C G T
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCCAKTCTCCCYT---
TACGAGACTCCTCTAAC
 A C G T A C G T A G T C A G T C C G T A A C T G C A G T G T A C A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C