Information for 4-TCCCGACCTC (Motif 16)

A G C T A G T C G T A C T A G C A C T G C G T A A G T C A T G C A G C T A G T C
Reverse Opposite:
A C T G C T G A A T C G A C T G C G A T A G T C A T C G C A T G C T A G C T G A
p-value:1e-9
log p-value:-2.284e+01
Information Content per bp:1.799
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.95%
Number of Background Sequences with motif298.6
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets56.0 +/- 27.0bp
Average Position of motif in Background49.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TCCCGACCTC-
---TGACCYCT
 A G C T A G T C G T A C T A G C A C T G C G T A A G T C A T G C A G C T A G T C A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCCCGACCTC-
---TGACCTYA
 A G C T A G T C G T A C T A G C A C T G C G T A A G T C A T G C A G C T A G T C A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

ZBTB7A/MA0750.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCCCGACCTC---
-GGCGACCACCGA
 A G C T A G T C G T A C T A G C A C T G C G T A A G T C A T G C A G C T A G T C A C G T A C G T A C G T
A C G T A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCCCGACCTC-----
GGTCCCGCCCCCTTCTC
 A C G T A C G T A G C T A G T C G T A C T A G C A C T G C G T A A G T C A T G C A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

ZBTB7B/MA0694.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCCCGACCTC----
--GCGACCACCGAA
 A G C T A G T C G T A C T A G C A C T G C G T A A G T C A T G C A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCCCGACCTC----
--GCGACCACACTG
 A G C T A G T C G T A C T A G C A C T G C G T A A G T C A T G C A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCCCGACCTC----
--GCGACCACCGAA
 A G C T A G T C G T A C T A G C A C T G C G T A A G T C A T G C A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCCCGACCTC-
GCCMCGCCCMCY
 A C G T A G C T A G T C G T A C T A G C A C T G C G T A A G T C A T G C A G C T A G T C A C G T
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCCCGACCTC
---TGACCT-
 A G C T A G T C G T A C T A G C A C T G C G T A A G T C A T G C A G C T A G T C
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCCCGACCTC-----
TGTCGTGACCCCTTAAT
 A C G T A C G T A G C T A G T C G T A C T A G C A C T G C G T A A G T C A T G C A G C T A G T C A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T