Information for 8-ATTGTATTCAGTG (Motif 9)

G T C A A G C T A C G T A T C G C G A T G C T A A C G T A C G T A G T C C G T A A C T G A C G T C A T G
Reverse Opposite:
G A T C C G T A T A G C C G A T A C T G T C G A G T C A C A G T C G T A A T G C C G T A C T G A A C G T
p-value:1e-13
log p-value:-3.167e+01
Information Content per bp:1.793
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.9 +/- 26.6bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ATTGTATTCAGTG
CCATTGTATGCAAAT
 A C G T A C G T G T C A A G C T A C G T A T C G C G A T G C T A A C G T A C G T A G T C C G T A A C T G A C G T C A T G
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

SRY/MA0084.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTGTATTCAGTG
ATTGTTTAN----
 G T C A A G C T A C G T A T C G C G A T G C T A A C G T A C G T A G T C C G T A A C T G A C G T C A T G
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATTGTATTCAGTG
TTCAATTGTTCTAAAA-
 A C G T A C G T A C G T A C G T G T C A A G C T A C G T A T C G C G A T G C T A A C G T A C G T A G T C C G T A A C T G A C G T C A T G
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTATTCAGTG
NNNCCATTGTGTNAN---
 A C G T A C G T A C G T A C G T A C G T G T C A A G C T A C G T A T C G C G A T G C T A A C G T A C G T A G T C C G T A A C T G A C G T C A T G
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ATTGTATTCAGTG
NNNTATTGAATTGNNN-
 A C G T A C G T A C G T A C G T G T C A A G C T A C G T A T C G C G A T G C T A A C G T A C G T A G T C C G T A A C T G A C G T C A T G
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATTGTATTCAGTG
TAATTGTTCTAAAC-
 A C G T A C G T G T C A A G C T A C G T A T C G C G A T G C T A A C G T A C G T A G T C C G T A A C T G A C G T C A T G
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATTGTATTCAGTG
CCATTGTTNY-----
 A C G T A C G T G T C A A G C T A C G T A T C G C G A T G C T A A C G T A C G T A G T C C G T A A C T G A C G T C A T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATTGTATTCAGTG
ATTGTTA------
 G T C A A G C T A C G T A T C G C G A T G C T A A C G T A C G T A G T C C G T A A C T G A C G T C A T G
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATTGTATTCAGTG
CCATTGTTYB-----
 A C G T A C G T G T C A A G C T A C G T A T C G C G A T G C T A A C G T A C G T A G T C C G T A A C T G A C G T C A T G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATTGTATTCAGTG
CTCATTGTC-------
 A C G T A C G T A C G T G T C A A G C T A C G T A T C G C G A T G C T A A C G T A C G T A G T C C G T A A C T G A C G T C A T G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T