Information for 19-AGRGAHAGGCTTG (Motif 25)

C T G A A C T G C T A G C T A G G T C A G A C T C G T A C T A G T C A G G T A C C G A T C G A T A T C G
Reverse Opposite:
A T G C C G T A G C T A A C T G A G T C G A T C C G A T C T G A C A G T G A T C G A T C T G A C G A C T
p-value:1e-10
log p-value:-2.321e+01
Information Content per bp:1.590
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.7 +/- 18.6bp
Average Position of motif in Background34.4 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:AGRGAHAGGCTTG
------AAGCTTG
 C T G A A C T G C T A G C T A G G T C A G A C T C G T A C T A G T C A G G T A C C G A T C G A T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:AGRGAHAGGCTTG
-------NGCTN-
 C T G A A C T G C T A G C T A G G T C A G A C T C G T A C T A G T C A G G T A C C G A T C G A T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AGRGAHAGGCTTG---
-----AAGGCAAGTGT
 C T G A A C T G C T A G C T A G G T C A G A C T C G T A C T A G T C A G G T A C C G A T C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGRGAHAGGCTTG-----
---CAAAGGCGTGGCCAG
 C T G A A C T G C T A G C T A G G T C A G A C T C G T A C T A G T C A G G T A C C G A T C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGRGAHAGGCTTG-
--TGATTGGCTANN
 C T G A A C T G C T A G C T A G G T C A G A C T C G T A C T A G T C A G G T A C C G A T C G A T A T C G A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AGRGAHAGGCTTG-
------AGGCCTNG
 C T G A A C T G C T A G C T A G G T C A G A C T C G T A C T A G T C A G G T A C C G A T C G A T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGRGAHAGGCTTG
TGAGTGACAGSC---
 A C G T A C G T C T G A A C T G C T A G C T A G G T C A G A C T C G T A C T A G T C A G G T A C C G A T C G A T A T C G
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:AGRGAHAGGCTTG--
-------GGCGCGCT
 C T G A A C T G C T A G C T A G G T C A G A C T C G T A C T A G T C A G G T A C C G A T C G A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGRGAHAGGCTTG-
TATAGAGATAAGAATTG
 A C G T A C G T A C G T C T G A A C T G C T A G C T A G G T C A G A C T C G T A C T A G T C A G G T A C C G A T C G A T A T C G A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGRGAHAGGCTTG-
AGGGGGATTAGCTGCC
 A C G T A C G T C T G A A C T G C T A G C T A G G T C A G A C T C G T A C T A G T C A G G T A C C G A T C G A T A T C G A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C