Information for 13-ACGGAGCTTW (Motif 20)

C T G A A T G C A T C G A C T G G C T A A C T G A T G C A C G T A C G T C G A T
Reverse Opposite:
G C T A C G T A C G T A A T C G A G T C C A G T A G T C A T G C A T C G A G C T
p-value:1e-11
log p-value:-2.554e+01
Information Content per bp:1.813
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets56.3 +/- 24.0bp
Average Position of motif in Background46.2 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:ACGGAGCTTW
-CGGAGC---
 C T G A A T G C A T C G A C T G G C T A A C T G A T G C A C G T A C G T C G A T
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACGGAGCTTW
---AAGCTTG
 C T G A A T G C A T C G A C T G G C T A A C T G A T G C A C G T A C G T C G A T
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACGGAGCTTW
TGCTGTGATTT
 A C G T C T G A A T G C A T C G A C T G G C T A A C T G A T G C A C G T A C G T C G A T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACGGAGCTTW-
-CNGTGATTTN
 C T G A A T G C A T C G A C T G G C T A A C T G A T G C A C G T A C G T C G A T A C G T
A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACGGAGCTTW
GCAGTGATTT
 C T G A A T G C A T C G A C T G G C T A A C T G A T G C A C G T A C G T C G A T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ACGGAGCTTW
----NGCTN-
 C T G A A T G C A T C G A C T G G C T A A C T G A T G C A C G T A C G T C G A T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Crx/MA0467.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACGGAGCTTW-
AAGAGGATTAG
 C T G A A T G C A T C G A C T G G C T A A C T G A T G C A C G T A C G T C G A T A C G T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0121.1_Obox1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ACGGAGCTTW-----
TTAAGGGGATTAACTAC
 A C G T A C G T C T G A A T G C A T C G A C T G G C T A A C T G A T G C A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0122.1_Obox2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ACGGAGCTTW-----
TGAGGGGGATTAACTAT
 A C G T A C G T C T G A A T G C A T C G A C T G G C T A A C T G A T G C A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----ACGGAGCTTW
RGKGGGCGGAGC---
 A C G T A C G T A C G T A C G T A C G T C T G A A T G C A T C G A C T G G C T A A C T G A T G C A C G T A C G T C G A T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T