Information for 10-CACGGTCCAA (Motif 13)

A G T C C G T A G T A C A C T G T A C G A C G T A T G C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A T C G C G T A A G T C G T A C A C T G A C G T C T A G
p-value:1e-11
log p-value:-2.738e+01
Information Content per bp:1.870
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets67.6 +/- 26.6bp
Average Position of motif in Background47.8 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CACGGTCCAA---
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A G T C C G T A G T A C A C T G T A C G A C G T A T G C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CACGGTCCAA
CANAGNNCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C T G T A C G A C G T A T G C A G T C C G T A C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CACGGTCCAA-
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C T G T A C G A C G T A T G C A G T C C G T A C G T A A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CACGGTCCAA
TCAAGGTCATA
 A C G T A G T C C G T A G T A C A C T G T A C G A C G T A T G C A G T C C G T A C G T A
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CACGGTCCAA
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C T G T A C G A C G T A T G C A G T C C G T A C G T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CACGGTCCAA---
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C T G T A C G A C G T A T G C A G T C C G T A C G T A A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CACGGTCCAA----
--AGATGCAATCCC
 A G T C C G T A G T A C A C T G T A C G A C G T A T G C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CACGGTCCAA
TCAAGGTCAT-
 A C G T A G T C C G T A G T A C A C T G T A C G A C G T A T G C A G T C C G T A C G T A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CACGGTCCAA
BTCAAGGTCA--
 A C G T A C G T A G T C C G T A G T A C A C T G T A C G A C G T A T G C A G T C C G T A C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CACGGTCCAA
TCAAGGTCAN-
 A C G T A G T C C G T A G T A C A C T G T A C G A C G T A T G C A G T C C G T A C G T A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T