Information for 11-ACAGGCAGGTGTC (Motif 12)

G C T A G A T C T C G A C T A G T A C G G A T C C G T A C A T G A C T G C G A T A C T G C A G T T A G C
Reverse Opposite:
A T C G G T C A T G A C C G T A T G A C G T A C C G A T C A T G A G T C A G T C A C G T C T A G C G A T
p-value:1e-12
log p-value:-2.875e+01
Information Content per bp:1.683
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.29%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets53.9 +/- 26.6bp
Average Position of motif in Background59.8 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:ACAGGCAGGTGTC
-AAGGCAAGTGT-
 G C T A G A T C T C G A C T A G T A C G G A T C C G T A C A T G A C T G C G A T A C T G C A G T T A G C
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

HES5/MA0821.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ACAGGCAGGTGTC-
--TGGCACGTGCCG
 G C T A G A T C T C G A C T A G T A C G G A T C C G T A C A T G A C T G C G A T A C T G C A G T T A G C A C G T
A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:ACAGGCAGGTGTC
---AACAGGTGT-
 G C T A G A T C T C G A C T A G T A C G G A T C C G T A C A T G A C T G C G A T A C T G C A G T T A G C
A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACAGGCAGGTGTC-
--SDGCAGGTGCNS
 G C T A G A T C T C G A C T A G T A C G G A T C C G T A C A T G A C T G C G A T A C T G C A G T T A G C A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

HEY2/MA0649.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:ACAGGCAGGTGTC
---GGCACGTGNC
 G C T A G A T C T C G A C T A G T A C G G A T C C G T A C A T G A C T G C G A T A C T G C A G T T A G C
A C G T A C G T A C G T A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACAGGCAGGTGTC
---GACAGGTGTN
 G C T A G A T C T C G A C T A G T A C G G A T C C G T A C A T G A C T G C G A T A C T G C A G T T A G C
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACAGGCAGGTGTC
---NNCAGGTGNN
 G C T A G A T C T C G A C T A G T A C G G A T C C G T A C A T G A C T G C G A T A C T G C A G T T A G C
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

HEY1/MA0823.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACAGGCAGGTGTC
---GGCACGTGTC
 G C T A G A T C T C G A C T A G T A C G G A T C C G T A C A T G A C T G C G A T A C T G C A G T T A G C
A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

HES7/MA0822.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACAGGCAGGTGTC-
--TGGCACGTGCCA
 G C T A G A T C T C G A C T A G T A C G G A T C C G T A C A T G A C T G C G A T A C T G C A G T T A G C A C G T
A C G T A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

Hes2/MA0616.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:ACAGGCAGGTGTC----
----GCACGTGTCNNNN
 G C T A G A T C T C G A C T A G T A C G G A T C C G T A C A T G A C T G C G A T A C T G C A G T T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A