Information for 9-TTGGCTGTAGGCC (Motif 10)

A G C T C A G T C A T G T A C G T A G C G C A T A C T G G A C T C T G A A C T G A T C G T G A C A G T C
Reverse Opposite:
T C A G A C T G T A G C T G A C G A C T C T G A T G A C C G T A A T C G A G T C G T A C G T C A T C G A
p-value:1e-12
log p-value:-2.971e+01
Information Content per bp:1.649
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.29%
Number of Background Sequences with motif19.5
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets51.8 +/- 23.1bp
Average Position of motif in Background39.5 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTGGCTGTAGGCC--
CTTGGCANNNTGCCAA
 A C G T A G C T C A G T C A T G T A C G T A G C G C A T A C T G G A C T C T G A A C T G A T C G T G A C A G T C A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTGGCTGTAGGCC-
CTGGCAGNCTGCCA
 A G C T C A G T C A T G T A C G T A G C G C A T A C T G G A C T C T G A A C T G A T C G T G A C A G T C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTGGCTGTAGGCC-
TTGGCATGGTGCCA
 A G C T C A G T C A T G T A C G T A G C G C A T A C T G G A C T C T G A A C T G A T C G T G A C A G T C A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGGCTGTAGGCC
TTGGCA-------
 A G C T C A G T C A T G T A C G T A G C G C A T A C T G G A C T C T G A A C T G A T C G T G A C A G T C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCTGTAGGCC
NTTGGCANN-----
 A C G T A G C T C A G T C A T G T A C G T A G C G C A T A C T G G A C T C T G A A C T G A T C G T G A C A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TTGGCTGTAGGCC
---GCTGTG----
 A G C T C A G T C A T G T A C G T A G C G C A T A C T G G A C T C T G A A C T G A T C G T G A C A G T C
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGGCTGTAGGCC
-TGGCAGTTGG--
 A G C T C A G T C A T G T A C G T A G C G C A T A C T G G A C T C T G A A C T G A T C G T G A C A G T C
A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTGGCTGTAGGCC
TWGTCTGV-----
 A G C T C A G T C A T G T A C G T A G C G C A T A C T G G A C T C T G A A C T G A T C G T G A C A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTGGCTGTAGGCC
--NGCTN------
 A G C T C A G T C A T G T A C G T A G C G C A T A C T G G A C T C T G A A C T G A T C G T G A C A G T C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGGCTGTAGGCC-
NTGCCCTTGGGCGN
 A G C T C A G T C A T G T A C G T A G C G C A T A C T G G A C T C T G A A C T G A T C G T G A C A G T C A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G