Information for 1-BCCTGYSATTGGY (Motif 1)

A T C G A T G C A G T C A C G T A T C G A G C T A T C G C G T A C G A T A C G T A C T G A C T G G A T C
Reverse Opposite:
C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C G A T A G C G T C A T C A G T A C G T A G C
p-value:1e-47
log p-value:-1.087e+02
Information Content per bp:1.641
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif11.89%
Number of Background Sequences with motif65.7
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets49.9 +/- 23.4bp
Average Position of motif in Background50.8 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.89
Offset:4
Orientation:reverse strand
Alignment:BCCTGYSATTGGY-
----CCGATTGGCT
 A T C G A T G C A G T C A C G T A T C G A G C T A T C G C G T A C G A T A C G T A C T G A C T G G A T C A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.87
Offset:5
Orientation:reverse strand
Alignment:BCCTGYSATTGGY----
-----TGATTGGCTANN
 A T C G A T G C A G T C A C G T A T C G A G C T A T C G C G T A C G A T A C G T A C T G A C T G G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.85
Offset:4
Orientation:reverse strand
Alignment:BCCTGYSATTGGY------
----CTGATTGGTCNATTT
 A T C G A T G C A G T C A C G T A T C G A G C T A T C G C G T A C G A T A C G T A C T G A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--BCCTGYSATTGGY---
AGAGTGCTGATTGGTCCA
 A C G T A C G T A T C G A T G C A G T C A C G T A T C G A G C T A T C G C G T A C G A T A C G T A C T G A C T G G A T C A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.74
Offset:8
Orientation:forward strand
Alignment:BCCTGYSATTGGY-
--------TTGGCA
 A T C G A T G C A G T C A C G T A T C G A G C T A T C G C G T A C G A T A C G T A C T G A C T G G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:BCCTGYSATTGGY
----TTGATTGN-
 A T C G A T G C A G T C A C G T A T C G A G C T A T C G C G T A C G A T A C G T A C T G A C T G G A T C
A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.70
Offset:7
Orientation:reverse strand
Alignment:BCCTGYSATTGGY---
-------NTTGGCANN
 A T C G A T G C A G T C A C G T A T C G A G C T A T C G C G T A C G A T A C G T A C T G A C T G G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:BCCTGYSATTGGY
--CNGTGATTTN-
 A T C G A T G C A G T C A C G T A T C G A G C T A T C G C G T A C G A T A C G T A C T G A C T G G A T C
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.67
Offset:4
Orientation:forward strand
Alignment:BCCTGYSATTGGY
----CTCATTGTC
 A T C G A T G C A G T C A C G T A T C G A G C T A T C G C G T A C G A T A C G T A C T G A C T G G A T C
A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

MSX2/MA0708.1/Jaspar

Match Rank:10
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:BCCTGYSATTGGY
----NTAATTGG-
 A T C G A T G C A G T C A C G T A T C G A G C T A T C G C G T A C G A T A C G T A C T G A C T G G A T C
A C G T A C G T A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T