Information for 2-TTGATTTGTWMCA (Motif 5)

A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G A T G T A C G A T C C G T A
Reverse Opposite:
A C G T C A T G A C G T C G A T C G T A A G T C C G T A C G T A C G T A C G A T A G T C G T C A C G T A
p-value:1e-13
log p-value:-3.164e+01
Information Content per bp:1.862
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.5 +/- 31.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTGATTTGTWMCA
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G A T G T A C G A T C C G T A
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTGATTTGTWMCA
NTTATTGATTTTTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G A T G T A C G A T C C G T A
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGATTTGTWMCA
ATTGATTYND----
 A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G A T G T A C G A T C C G T A
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTGATTTGTWMCA
NNTTTTGTTTTGATNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G A T G T A C G A T C C G T A
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTGATTTGTWMCA
CNGTGATTTN-----
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G A T G T A C G A T C C G T A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTGATTTGTWMCA
ATTATCGATTTTTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G A T G T A C G A T C C G T A
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTGATTTGTWMCA
--CCATTGTTNY-
 A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G A T G T A C G A T C C G T A
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TTGATTTGTWMCA
----ATTGTT---
 A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G A T G T A C G A T C C G T A
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTGATTTGTWMCA
ANTATCGATTTTTN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G A T G T A C G A T C C G T A
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTGATTTGTWMCA
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G A T G T A C G A T C C G T A
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T