Information for 10-AGCATGCTGGGAG (Motif 10)

C T G A A T C G T G A C G C T A C A G T A C T G A G T C A G C T C T A G A C T G C T A G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C A G T C C T G A A C T G A G T C G T C A C A G T A C T G A T G C A G C T
p-value:1e-7
log p-value:-1.741e+01
Information Content per bp:1.816
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif18.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.9 +/- 24.3bp
Average Position of motif in Background48.4 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:AGCATGCTGGGAG--
RGSMTBCTGGGAAAT
 C T G A A T C G T G A C G C T A C A G T A C T G A G T C A G C T C T A G A C T G C T A G C G T A A C T G A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGCATGCTGGGAG-
TCNCCTGCTGNGNNN
 A C G T C T G A A T C G T G A C G C T A C A G T A C T G A G T C A G C T C T A G A C T G C T A G C G T A A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGCATGCTGGGAG-
TNTCCTGCTGTGNNG
 A C G T C T G A A T C G T G A C G C T A C A G T A C T G A G T C A G C T C T A G A C T G C T A G C G T A A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGCATGCTGGGAG
--CCTGCTGAGH-
 C T G A A T C G T G A C G C T A C A G T A C T G A G T C A G C T C T A G A C T G C T A G C G T A A C T G
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGCATGCTGGGAG-
NNTCCTGCTGTGNNN
 A C G T C T G A A T C G T G A C G C T A C A G T A C T G A G T C A G C T C T A G A C T G C T A G C G T A A C T G A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCATGCTGGGAG--------
-GCATTCTGGGAATTGTAGTT
 C T G A A T C G T G A C G C T A C A G T A C T G A G T C A G C T C T A G A C T G C T A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCATGCTGGGAG--------
-GCMTBCTGGGAGTTGTAGTY
 C T G A A T C G T G A C G C T A C A G T A C T G A G T C A G C T C T A G A C T G C T A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCATGCTGGGAG
CCCCCTGCTGTG--
 A C G T C T G A A T C G T G A C G C T A C A G T A C T G A G T C A G C T C T A G A C T G C T A G C G T A A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCATGCTGGGAG
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T C T G A A T C G T G A C G C T A C A G T A C T G A G T C A G C T C T A G A C T G C T A G C G T A A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGCATGCTGGGAG
----NGCTN----
 C T G A A T C G T G A C G C T A C A G T A C T G A G T C A G C T C T A G A C T G C T A G C G T A A C T G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T