p-value: | 1e-4 |
log p-value: | -1.132e+01 |
Information Content per bp: | 1.937 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.44% |
Number of Background Sequences with motif | 3.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 53.0 +/- 18.4bp |
Average Position of motif in Background | 49.7 +/- 31.6bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.67 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0208.1_Zscan4_2/Jaspar
Match Rank: | 1 |
Score: | 0.58 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------GTGTGCGTAGGTC NNNNTTGTGTGCTTNN--- |
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PB0161.1_Rxra_2/Jaspar
Match Rank: | 2 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTGTGCGTAGGTC----- --TCGCGAAGGTTGTACT |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | GTGTGCGTAGGTC- --------AGGTCA |
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PB0130.1_Gm397_2/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------GTGTGCGTAGGTC NNGCGTGTGTGCNGCN--- |
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PB0044.1_Mtf1_1/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GTGTGCGTAGGTC GGGCCGTGTGCAAAAA-- |
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Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer
Match Rank: | 6 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTGTGCGTAGGTC RGKGGGCGGAGC-- |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTGTGCGTAGGTC-- -TATAAGTAGGTCAA |
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EGR4/MA0733.1/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------GTGTGCGTAGGTC AANTGCGTGGGCGTNN--- |
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EGR3/MA0732.1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GTGTGCGTAGGTC ANTGCGTGGGCGTNN--- |
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Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GTGTGCGTAGGTC ---TGCGTGGGYG |
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