Information for 20-GAACGTATTGTGG (Motif 40)

T C A G G T C A C T G A G T A C A T C G C G A T C G T A A C G T A C G T C A T G A G C T C A T G A C T G
Reverse Opposite:
A G T C G A T C T C G A G A T C C G T A T G C A G A C T C G T A T A G C A C T G G A C T A C G T A G T C
p-value:1e-5
log p-value:-1.289e+01
Information Content per bp:1.690
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif79.7
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets57.0 +/- 24.1bp
Average Position of motif in Background44.1 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GAACGTATTGTGG----
-----NNHTGTGGTTWN
 T C A G G T C A C T G A G T A C A T C G C G A T C G T A A C G T A C G T C A T G A G C T C A T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GAACGTATTGTGG---
------TTTGCGGTTT
 T C A G G T C A C T G A G T A C A T C G C G A T C G T A A C G T A C G T C A T G A G C T C A T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

PB0183.1_Sry_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAACGTATTGTGG-----
-CNNNTATTGTTCNNNNN
 T C A G G T C A C T G A G T A C A T C G C G A T C G T A A C G T A C G T C A T G A G C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GAACGTATTGTGG
---CTCATTGTC-
 T C A G G T C A C T G A G T A C A T C G C G A T C G T A A C G T A C G T C A T G A G C T C A T G A C T G
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAACGTATTGTGG----
--NNNTGTTGTTGTTNG
 T C A G G T C A C T G A G T A C A T C G C G A T C G T A A C G T A C G T C A T G A G C T C A T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAACGTATTGTGG-----
-AATCAATTGTTCCGCTA
 T C A G G T C A C T G A G T A C A T C G C G A T C G T A A C G T A C G T C A T G A G C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GAACGTATTGTGG---
-------TTGCGGTTT
 T C A G G T C A C T G A G T A C A T C G C G A T C G T A A C G T A C G T C A T G A G C T C A T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

ZNF410/MA0752.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAACGTATTGTGG------
--GANTATTATGGGATGGA
 T C A G G T C A C T G A G T A C A T C G C G A T C G T A A C G T A C G T C A T G A G C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GAACGTATTGTGG---
-----GTCTGTGGTTT
 T C A G G T C A C T G A G T A C A T C G C G A T C G T A A C G T A C G T C A T G A G C T C A T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GAACGTATTGTGG
------ATTGTT-
 T C A G G T C A C T G A G T A C A T C G C G A T C G T A A C G T A C G T C A T G A G C T C A T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T