Information for 2-HGAAGTCMCTGCCCTC (Motif 4)

G C A T T A C G G T C A C G T A A C T G A C G T A G T C G T C A A G T C C G A T A C T G A T G C G T A C G T A C G C A T A G T C
Reverse Opposite:
C T A G C G T A A C T G A C T G A T C G G T A C C G T A A C T G A C G T A C T G G T C A A G T C A C G T A C G T A T G C C G A T
p-value:1e-13
log p-value:-3.222e+01
Information Content per bp:1.760
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.6 +/- 20.2bp
Average Position of motif in Background56.3 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:HGAAGTCMCTGCCCTC
-NAGGTCANTGACCT-
 G C A T T A C G G T C A C G T A A C T G A C G T A G T C G T C A A G T C C G A T A C T G A T G C G T A C G T A C G C A T A G T C
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:HGAAGTCMCTGCCCTC
--AAATCACAGCA---
 G C A T T A C G G T C A C G T A A C T G A C G T A G T C G T C A A G T C C G A T A C T G A T G C G T A C G T A C G C A T A G T C
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:HGAAGTCMCTGCCCTC
--AAATCACTGC----
 G C A T T A C G G T C A C G T A A C T G A C G T A G T C G T C A A G T C C G A T A C T G A T G C G T A C G T A C G C A T A G T C
A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:HGAAGTCMCTGCCCTC
AAAAGTCAA-------
 G C A T T A C G G T C A C G T A A C T G A C G T A G T C G T C A A G T C C G A T A C T G A T G C G T A C G T A C G C A T A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--HGAAGTCMCTGCCCTC
AGGGAAGTCATTTCT---
 A C G T A C G T G C A T T A C G G T C A C G T A A C T G A C G T A G T C G T C A A G T C C G A T A C T G A T G C G T A C G T A C G C A T A G T C
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---HGAAGTCMCTGCCCTC-
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T G C A T T A C G G T C A C G T A A C T G A C G T A G T C G T C A A G T C C G A T A C T G A T G C G T A C G T A C G C A T A G T C A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:HGAAGTCMCTGCCCTC--
-AATCGCACTGCATTCCG
 G C A T T A C G G T C A C G T A A C T G A C G T A G T C G T C A A G T C C G A T A C T G A T G C G T A C G T A C G C A T A G T C A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:HGAAGTCMCTGCCCTC
-CAAATCACTG-----
 G C A T T A C G G T C A C G T A A C T G A C G T A G T C G T C A A G T C C G A T A C T G A T G C G T A C G T A C G C A T A G T C
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:HGAAGTCMCTGCCCTC
---AGTCACGC-----
 G C A T T A C G G T C A C G T A A C T G A C G T A G T C G T C A A G T C C G A T A C T G A T G C G T A C G T A C G C A T A G T C
A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:HGAAGTCMCTGCCCTC
----GGCCCCGCCCCC
 G C A T T A C G G T C A C G T A A C T G A C G T A G T C G T C A A G T C C G A T A C T G A T G C G T A C G T A C G C A T A G T C
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C