Information for 9-TCAGCCGGCGCCGCGC (Motif 16)

A C G T A G T C G T C A A C T G A G T C A G T C A C T G A C T G A G T C A C T G A G T C G T A C A T C G A G T C A C T G A T G C
Reverse Opposite:
A T C G A G T C C T A G A T G C A C T G A C T G G T A C C T A G G T A C A G T C C T A G A C T G A G T C A C G T A C T G C G T A
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 25.3bp
Average Position of motif in Background68.3 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCCGGCGCCGCGC
DCHCAGCAGGRGGCC---
 A C G T A C G T A C G T A G T C G T C A A C T G A G T C A G T C A C T G A C T G A G T C A C T G A G T C G T A C A T C G A G T C A C T G A T G C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCCGGCGCCGCGC
DCTCAGCAGG--------
 A C G T A C G T A C G T A G T C G T C A A C T G A G T C A G T C A C T G A C T G A G T C A C T G A G T C G T A C A T C G A G T C A C T G A T G C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCAGCCGGCGCCGCGC
NAHCAGCTGD--------
 A C G T A C G T A C G T A G T C G T C A A C T G A G T C A G T C A C T G A C T G A G T C A C T G A G T C G T A C A T C G A G T C A C T G A T G C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.52
Offset:9
Orientation:forward strand
Alignment:TCAGCCGGCGCCGCGC-------
---------GCCGCGCAGTGCGT
 A C G T A G T C G T C A A C T G A G T C A G T C A C T G A C T G A G T C A C T G A G T C G T A C A T C G A G T C A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TCAGCCGGCGCCGCGC
------GGTCCCGCCC
 A C G T A G T C G T C A A C T G A G T C A G T C A C T G A C T G A G T C A C T G A G T C G T A C A T C G A G T C A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TCAGCCGGCGCCGCGC
CACAGCAGGGGG-----
 A C G T A C G T A G T C G T C A A C T G A G T C A G T C A C T G A C T G A G T C A C T G A G T C G T A C A T C G A G T C A C T G A T G C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TCAGCCGGCGCCGCGC
NAACAGCTGG--------
 A C G T A C G T A C G T A G T C G T C A A C T G A G T C A G T C A C T G A C T G A G T C A C T G A G T C G T A C A T C G A G T C A C T G A T G C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TCAGCCGGCGCCGCGC
-SDGCAGGTGCNS---
 A C G T A G T C G T C A A C T G A G T C A G T C A C T G A C T G A G T C A C T G A G T C G T A C A T C G A G T C A C T G A T G C
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TCAGCCGGCGCCGCGC-
NNNNTTGGCGCCGANNN
 A C G T A G T C G T C A A C T G A G T C A G T C A C T G A C T G A G T C A C T G A G T C G T A C A T C G A G T C A C T G A T G C A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:forward strand
Alignment:TCAGCCGGCGCCGCGC--
------GGCCCCGCCCCC
 A C G T A G T C G T C A A C T G A G T C A G T C A C T G A C T G A G T C A C T G A G T C G T A C A T C G A G T C A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C