Information for 2-GCCACCTGGT (Motif 4)

C A T G G A T C T G A C G T C A A G T C T G A C G C A T A T C G T A C G G C A T
Reverse Opposite:
C G T A A T G C T A G C C G T A A C T G T C A G C A G T A C T G C T A G G T A C
p-value:1e-15
log p-value:-3.603e+01
Information Content per bp:1.595
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.88%
Number of Background Sequences with motif276.3
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets52.8 +/- 22.7bp
Average Position of motif in Background52.2 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GCCACCTGGT
GCCATCTGTT
 C A T G G A T C T G A C G T C A A G T C T G A C G C A T A T C G T A C G G C A T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GCCACCTGGT--
GCCAGCTGBTNB
 C A T G G A T C T G A C G T C A A G T C T G A C G C A T A T C G T A C G G C A T A C G T A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

FIGLA/MA0820.1/Jaspar

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GCCACCTGGT
ACCACCTGTT
 C A T G G A T C T G A C G T C A A G T C T G A C G C A T A T C G T A C G G C A T
G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----GCCACCTGGT-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T C A T G G A T C T G A C G T C A A G T C T G A C G C A T A T C G T A C G G C A T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----GCCACCTGGT-----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T C A T G G A T C T G A C G T C A A G T C T G A C G C A T A T C G T A C G G C A T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCCACCTGGT
NNCACCTGNN
 C A T G G A T C T G A C G T C A A G T C T G A C G C A T A T C G T A C G G C A T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.74
Offset:-7
Orientation:forward strand
Alignment:-------GCCACCTGGT---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A T C T G A C G T C A A G T C T G A C G C A T A T C G T A C G G C A T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GCCACCTGGT--
NVCAGCTGBBNN
 C A T G G A T C T G A C G T C A A G T C T G A C G C A T A T C G T A C G G C A T A C G T A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCCACCTGGT
NNVCAGCTGB-
 A C G T C A T G G A T C T G A C G T C A A G T C T G A C G C A T A T C G T A C G G C A T
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCCACCTGGT
RCCATMTGTT
 C A T G G A T C T G A C G T C A A G T C T G A C G C A T A T C G T A C G G C A T
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T