Information for 16-GTTGCTCTCA (Motif 34)

A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G C G T A A C T G A G T C C G T A C G T A A G T C
p-value:1e-6
log p-value:-1.384e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.2 +/- 21.3bp
Average Position of motif in Background70.9 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GTTGCTCTCA-
---GCTGTCAA
 A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTTGCTCTCA--
-AGCCACTCAAG
 A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTTGCTCTCA--
NCCGTTGCTANGNGN
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTTGCTCTCA-----
NNNCAGCTGTCAATATN
 A C G T A C G T A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

SPIB/MA0081.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTGCTCTCA
-TTCCTCT--
 A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A
A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTTGCTCTCA-
-AASCACTCAA
 A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTTGCTCTCA--
--TGGTTTCAGT
 A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTTGCTCTCA--
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTTGCTCTCA-
---CCTGTCAA
 A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTTGCTCTCA--
--NSCACTYVAV
 A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G