Information for 8-TCTGCTCGTT (Motif 23)

A C G T A G T C C G A T A C T G A G T C A C G T A G T C A C T G A C G T C G A T
Reverse Opposite:
C G T A C G T A A G T C A C T G C G T A A C T G A G T C C G T A A C T G C G T A
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.939
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.5 +/- 21.3bp
Average Position of motif in Background49.6 +/- 44.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCTGCTCGTT----
---GCTCGTAAAAA
 A C G T A G T C C G A T A C T G A G T C A C G T A G T C A C T G A C G T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCTGCTCGTT
--NGCTN---
 A C G T A G T C C G A T A C T G A G T C A C G T A G T C A C T G A C G T C G A T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TCTGCTCGTT-
---GCACGTAY
 A C G T A G T C C G A T A C T G A G T C A C G T A G T C A C T G A C G T C G A T A C G T
A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCTGCTCGTT------
AAACCTCGTAAAATTT
 A C G T A G T C C G A T A C T G A G T C A C G T A G T C A C T G A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCTGCTCGTT---
---GCACGTACCC
 A C G T A G T C C G A T A C T G A G T C A C G T A G T C A C T G A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

PH0068.1_Hoxc13/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCTGCTCGTT------
AAAGCTCGTAAAATTT
 A C G T A G T C C G A T A C T G A G T C A C G T A G T C A C T G A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

TFAP4/MA0691.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCTCGTT
ATCAGCTGTT-
 A C G T A C G T A G T C C G A T A C T G A G T C A C G T A G T C A C T G A C G T C G A T
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCTGCTCGTT
--BGCACGTA
 A C G T A G T C C G A T A C T G A G T C A C G T A G T C A C T G A C G T C G A T
A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCTCGTT
NGTCAGCANTTT
 A C G T A C G T A C G T A G T C C G A T A C T G A G T C A C G T A G T C A C T G A C G T C G A T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TCTGCTCGTT
VBSYGTCTGG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A G T C A C G T A G T C A C T G A C G T C G A T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T