Information for 13-ARCTASCACTRAM (Motif 17)

C G T A C T A G A G T C C G A T C G T A A T G C A G T C G T C A A G T C A C G T C T A G C G T A G T C A
Reverse Opposite:
A C G T A C G T A G T C C G T A A C T G A C G T A C T G A T C G A C G T C G T A A C T G A G T C A C G T
p-value:1e-9
log p-value:-2.256e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.0 +/- 22.6bp
Average Position of motif in Background70.0 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-1/MA0124.2/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ARCTASCACTRAM
----ACCACTTAA
 C G T A C T A G A G T C C G A T C G T A A T G C A G T C G T C A A G T C A C G T C T A G C G T A G T C A
A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

NKX3-2/MA0122.2/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:ARCTASCACTRAM
----ACCACTTAA
 C G T A C T A G A G T C C G A T C G T A A T G C A G T C G T C A A G T C A C G T C T A G C G T A G T C A
A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ARCTASCACTRAM
---AAGCACTTAA
 C G T A C T A G A G T C C G A T C G T A A T G C A G T C G T C A A G T C A C G T C T A G C G T A G T C A
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

ZBTB7C/MA0695.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ARCTASCACTRAM
-GCGACCACCGAA
 C G T A C T A G A G T C C G A T C G T A A T G C A G T C G T C A A G T C A C G T C T A G C G T A G T C A
A C G T C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ARCTASCACTRAM
---MRSCACTYAA
 C G T A C T A G A G T C C G A T C G T A A T G C A G T C G T C A A G T C A C G T C T A G C G T A G T C A
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

ZBTB7B/MA0694.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ARCTASCACTRAM
-GCGACCACCGAA
 C G T A C T A G A G T C C G A T C G T A A T G C A G T C G T C A A G T C A C G T C T A G C G T A G T C A
A C G T C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ARCTASCACTRAM
---AASCACTCAA
 C G T A C T A G A G T C C G A T C G T A A T G C A G T C G T C A A G T C A C G T C T A G C G T A G T C A
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ARCTASCACTRAM-
----ACCACTTGAA
 C G T A C T A G A G T C C G A T C G T A A T G C A G T C G T C A A G T C A C G T C T A G C G T A G T C A A C G T
A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ARCTASCACTRAM-
----RSCACTYRAG
 C G T A C T A G A G T C C G A T C G T A A T G C A G T C G T C A A G T C A C G T C T A G C G T A G T C A A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ARCTASCACTRAM----
CATAACCACTTAACAAC
 C G T A C T A G A G T C C G A T C G T A A T G C A G T C G T C A A G T C A C G T C T A G C G T A G T C A A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C