Information for 12-RTGWATGCAGTGG (Motif 16)

T C G A A C G T A T C G C G T A T C G A A C G T C T A G A T G C C G T A A C T G C G A T C A T G A T C G
Reverse Opposite:
A T G C G T A C C G T A A G T C A C G T A T C G A G T C T G C A A G C T C G A T A T G C C G T A A G C T
p-value:1e-9
log p-value:-2.284e+01
Information Content per bp:1.731
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif37.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets54.9 +/- 27.0bp
Average Position of motif in Background49.1 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:RTGWATGCAGTGG----
NNNANTGCAGTGCNNTT
 T C G A A C G T A T C G C G T A T C G A A C G T C T A G A T G C C G T A A C T G C G A T C A T G A T C G A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:RTGWATGCAGTGG-
----BTBRAGTGSN
 T C G A A C G T A T C G C G T A T C G A A C G T C T A G A T G C C G T A A C T G C G A T C A T G A T C G A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:RTGWATGCAGTGG--
-----TTGAGTGSTT
 T C G A A C G T A T C G C G T A T C G A A C G T C T A G A T G C C G T A A C T G C G A T C A T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--RTGWATGCAGTGG
ATTTGCATACAATGG
 A C G T A C G T T C G A A C G T A T C G C G T A T C G A A C G T C T A G A T G C C G T A A C T G C G A T C A T G A T C G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:RTGWATGCAGTGG--
-----TTRAGTGSYK
 T C G A A C G T A T C G C G T A T C G A A C G T C T A G A T G C C G T A A C T G C G A T C A T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-RTGWATGCAGTGG---
NSTGTTTRCWCAGBNNN
 A C G T T C G A A C G T A T C G C G T A T C G A A C G T C T A G A T G C C G T A A C T G C G A T C A T G A T C G A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----RTGWATGCAGTGG
NTTNTATGAATGTGNNC-
 A C G T A C G T A C G T A C G T A C G T T C G A A C G T A T C G C G T A T C G A A C G T C T A G A T G C C G T A A C T G C G A T C A T G A T C G
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:RTGWATGCAGTGG-
----CTYRAGTGSY
 T C G A A C G T A T C G C G T A T C G A A C G T C T A G A T G C C G T A A C T G C G A T C A T G A T C G A C G T
A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:RTGWATGCAGTGG-
--ACAGGATGTGGT
 T C G A A C G T A T C G C G T A T C G A A C G T C T A G A T G C C G T A A C T G C G A T C A T G A T C G A C G T
A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------RTGWATGCAGTGG
NNTNTCATGAATGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A T C G C G T A T C G A A C G T C T A G A T G C C G T A A C T G C G A T C A T G A T C G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T