Information for 10-GGGGGGATTTCGC (Motif 11)

A C T G A C T G A C T G A T C G A C T G A C T G C G T A C G A T A C G T A C G T A T G C A C T G A G T C
Reverse Opposite:
A C T G G T A C A T C G C G T A C G T A C G T A A C G T A G T C A G T C A T G C A G T C A G T C A G T C
p-value:1e-10
log p-value:-2.500e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.2 +/- 19.0bp
Average Position of motif in Background47.4 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGGGGGATTTCGC
-NGGGGATTTCCC
 A C T G A C T G A C T G A T C G A C T G A C T G C G T A C G A T A C G T A C G T A T G C A C T G A G T C
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

PB0204.1_Zfp740_2/Jaspar

Match Rank:2
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GGGGGGATTTCGC
ANTNCCGGGGGGAANTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G A C T G A C T G C G T A C G A T A C G T A C G T A T G C A C T G A G T C
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGGGGGATTTCGC
--GGGGATTTCC-
 A C T G A C T G A C T G A T C G A C T G A C T G C G T A C G A T A C G T A C G T A T G C A C T G A G T C
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGGGGGATTTCGC-
--GGGGATTCCCCC
 A C T G A C T G A C T G A T C G A C T G A C T G C G T A C G A T A C G T A C G T A T G C A C T G A G T C A C G T
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGGGGGATTTCGC-
-AGGGGAATCCCCT
 A C T G A C T G A C T G A T C G A C T G A C T G C G T A C G A T A C G T A C G T A T G C A C T G A G T C A C G T
A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGGGGGATTTCGC
--GGGAATTTCC-
 A C T G A C T G A C T G A T C G A C T G A C T G C G T A C G A T A C G T A C G T A T G C A C T G A G T C
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGGGGGATTTCGC
--GGGAATTTCC-
 A C T G A C T G A C T G A T C G A C T G A C T G C G T A C G A T A C G T A C G T A T G C A C T G A G T C
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GGGGGGATTTCGC
ATTTTNGGGGGGCNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G A C T G A C T G C G T A C G A T A C G T A C G T A T G C A C T G A G T C
T C G A C A G T G C A T C G A T C G A T C G A T C A T G C T A G A C T G A C T G A C T G A T C G A G T C G A C T G A C T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGGGGGATTTCGC
--GGGGATTTCC-
 A C T G A C T G A C T G A T C G A C T G A C T G C G T A C G A T A C G T A C G T A T G C A C T G A G T C
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGGGGGATTTCGC
-TGGGGA------
 A C T G A C T G A C T G A T C G A C T G A C T G C G T A C G A T A C G T A C G T A T G C A C T G A G T C
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T