Information for 4-AAGGGGATTCCTG (Motif 9)

C T G A C G T A A C T G C T A G A T C G C T A G C G T A A C G T A C G T A G T C G A T C A C G T C T A G
Reverse Opposite:
A G T C G T C A C A T G A C T G C G T A G T C A A C G T A G T C A T G C A G T C A G T C A C G T A G C T
p-value:1e-9
log p-value:-2.300e+01
Information Content per bp:1.823
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.7 +/- 25.6bp
Average Position of motif in Background64.2 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB1/MA0105.4/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AAGGGGATTCCTG-
-AGGGGAATCCCCT
 C T G A C G T A A C T G C T A G A T C G C T A G C G T A A C G T A C G T A G T C G A T C A C G T C T A G A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AAGGGGATTCCTG-
--GGGGATTCCCCC
 C T G A C G T A A C T G C T A G A T C G C T A G C G T A A C G T A C G T A G T C G A T C A C G T C T A G A C G T
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

Crx/MA0467.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAGGGGATTCCTG
AAGAGGATTAG--
 C T G A C G T A A C T G C T A G A T C G C T A G C G T A A C G T A C G T A G T C G A T C A C G T C T A G
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGGGGATTCCTG-
-AGGGGATTCCCCT
 C T G A C G T A A C T G C T A G A T C G C T A G C G T A A C G T A C G T A G T C G A T C A C G T C T A G A C G T
A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAGGGGATTCCTG
-TGGGGA------
 C T G A C G T A A C T G C T A G A T C G C T A G C G T A A C G T A C G T A G T C G A T C A C G T C T A G
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AAGGGGATTCCTG-
----RCATTCCWGG
 C T G A C G T A A C T G C T A G A T C G C T A G C G T A A C G T A C G T A G T C G A T C A C G T C T A G A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAGGGGATTCCTG
-GGGGATTTCC--
 C T G A C G T A A C T G C T A G A T C G C T A G C G T A A C G T A C G T A G T C G A T C A C G T C T A G
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAGGGGATTCCTG---
AGAGGGGATTAATTTAT
 A C G T C T G A C G T A A C T G C T A G A T C G C T A G C G T A A C G T A C G T A G T C G A T C A C G T C T A G A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AAGGGGATTCCTG-
----GCATTCCAGN
 C T G A C G T A A C T G C T A G A T C G C T A G C G T A A C G T A C G T A G T C G A T C A C G T C T A G A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

PH0121.1_Obox1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGGGGATTCCTG--
TTAAGGGGATTAACTAC
 A C G T A C G T C T G A C G T A A C T G C T A G A T C G C T A G C G T A A C G T A C G T A G T C G A T C A C G T C T A G A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C