Information for 3-GAAATGTGGCTGT (Motif 5)

A C T G C G T A C G T A C G T A A C G T A C T G G C A T A C T G C T A G A G T C A C G T A C T G A C G T
Reverse Opposite:
G T C A A G T C C G T A A C T G A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A G T C
p-value:1e-10
log p-value:-2.478e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.8 +/- 27.1bp
Average Position of motif in Background67.6 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD1/MA0090.2/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAAATGTGGCTGT
NTGGAATGTG-----
 A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C T G G C A T A C T G C T A G A G T C A C G T A C T G A C G T
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAAATGTGGCTGT----
--GGNGCGNCTGTTNNN
 A C T G C G T A C G T A C G T A A C G T A C T G G C A T A C T G C T A G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAAATGTGGCTGT
-NNHTGTGGTTWN
 A C T G C G T A C G T A C G T A A C G T A C T G G C A T A C T G C T A G A G T C A C G T A C T G A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

TEAD4/MA0809.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAAATGTGGCTGT
NTGGAATGTN-----
 A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C T G G C A T A C T G C T A G A G T C A C G T A C T G A C G T
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.55
Offset:8
Orientation:forward strand
Alignment:GAAATGTGGCTGT-
--------GCTGTG
 A C T G C G T A C G T A C G T A A C G T A C T G G C A T A C T G C T A G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

TEAD3/MA0808.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAAATGTGGCTGT
TGGAATGT------
 A C G T A C T G C G T A C G T A C G T A A C G T A C T G G C A T A C T G C T A G A G T C A C G T A C T G A C G T
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAAATGTGGCTGT
GTCATGTGACC--
 A C T G C G T A C G T A C G T A A C G T A C T G G C A T A C T G C T A G A G T C A C G T A C T G A C G T
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GAAATGTGGCTGT
--NNTGTGGTTT-
 A C T G C G T A C G T A C G T A A C G T A C T G G C A T A C T G C T A G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAAATGTGGCTGT-
AAAAAGCGGAAGTA
 A C T G C G T A C G T A C G T A A C G T A C T G G C A T A C T G C T A G A G T C A C G T A C T G A C G T A C G T
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GAAATGTGGCTGT
-----TWGTCTGV
 A C T G C G T A C G T A C G T A A C G T A C T G G C A T A C T G C T A G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G