Information for 2-ACGTATGCAG (Motif 4)

C T G A A G T C C T A G A C G T G C T A A C G T A T C G A T G C C G T A C T A G
Reverse Opposite:
A G T C A C G T A T C G A T G C C G T A C G A T C G T A A G T C A C T G A G C T
p-value:1e-11
log p-value:-2.662e+01
Information Content per bp:1.862
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.8 +/- 13.1bp
Average Position of motif in Background52.6 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bhlha15/MA0607.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACGTATGCAG
ACATATGG--
 C T G A A G T C C T A G A C G T G C T A A C G T A T C G A T G C C G T A C T A G
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ACGTATGCAG---
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T C T G A A G T C C T A G A C G T G C T A A C G T A T C G A T G C C G T A C T A G A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACGTATGCAG
GHATATKCAT
 C T G A A G T C C T A G A C G T G C T A A C G T A T C G A T G C C G T A C T A G
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Twist2/MA0633.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACGTATGCAG
NACATATGGN-
 A C G T C T G A A G T C C T A G A C G T G C T A A C G T A T C G A T G C C G T A C T A G
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACGTATGCAG
AACATATGTT-
 A C G T C T G A A G T C C T A G A C G T G C T A A C G T A T C G A T G C C G T A C T A G
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACGTATGCAG
GCCATATGGT-
 A C G T C T G A A G T C C T A G A C G T G C T A A C G T A T C G A T G C C G T A C T A G
T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACGTATGCAG
ACCATATGGT-
 A C G T C T G A A G T C C T A G A C G T G C T A A C G T A T C G A T G C C G T A C T A G
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACGTATGCAG------
AAAATATGCATAATAAA
 A C G T C T G A A G T C C T A G A C G T G C T A A C G T A T C G A T G C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

BHLHE22/MA0818.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACGTATGCAG
ACCATATGTT-
 A C G T C T G A A G T C C T A G A C G T G C T A A C G T A T C G A T G C C G T A C T A G
T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACGTATGCAG
GCACGTACCC--
 A C G T A C G T C T G A A G T C C T A G A C G T G C T A A C G T A T C G A T G C C G T A C T A G
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T