Information for 6-CATTCTSATWWAW (Motif 14)

A G T C C G T A A C G T A C G T A G T C A C G T A T C G C T G A A C G T C G T A C G T A C G T A C G T A
Reverse Opposite:
C G A T A C G T C G A T C G A T T C G A A G C T A T G C C G T A A C T G C G T A C G T A A C G T A C T G
p-value:1e-9
log p-value:-2.133e+01
Information Content per bp:1.870
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.2 +/- 23.4bp
Average Position of motif in Background30.4 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CATTCTSATWWAW---
AAAGCTCGTAAAATTT
 A G T C C G T A A C G T A C G T A G T C A C G T A T C G C T G A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CATTCTSATWWAW
---NCYAATAAAA
 A G T C C G T A A C G T A C G T A G T C A C G T A T C G C T G A A C G T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CATTCTSATWWAW
NANTATTATAATTNNN
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A T C G C T G A A C G T C G T A C G T A C G T A C G T A
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CATTCTSATWWAW
TTTAATTATAATTAAG
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A T C G C T G A A C G T C G T A C G T A C G T A C G T A
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CATTCTSATWWAW--
CTTTGTTATGCAAAT
 A G T C C G T A A C G T A C G T A G T C A C G T A T C G C T G A A C G T C G T A C G T A C G T A C G T A A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CATTCTSATWWAW
CACATTCCAT-----
 A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A T C G C T G A A C G T C G T A C G T A C G T A C G T A
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CATTCTSATWWAW-
---GCTCGTAAAAA
 A G T C C G T A A C G T A C G T A G T C A C G T A T C G C T G A A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CATTCTSATWWAW
---CCYMATAAAA
 A G T C C G T A A C G T A C G T A G T C A C G T A T C G C T G A A C G T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CATTCTSATWWAW---
AAACCTCGTAAAATTT
 A G T C C G T A A C G T A C G T A G T C A C G T A T C G C T G A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CATTCTSATWWAW
CTCATTGTC------
 A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A T C G C T G A A C G T C G T A C G T A C G T A C G T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T