Information for 8-ACWTACATCATTHAMA (Motif 9)

C G T A A G T C C G A T A C G T C T G A A T G C C G T A C G A T T G A C G T C A A C G T A G C T G T C A C G T A G T A C C G T A
Reverse Opposite:
C G A T A C T G A C G T C A G T C T G A C G T A A C G T A C T G C G T A A C G T A T C G A G C T C G T A G C T A C T A G C G A T
p-value:1e-11
log p-value:-2.680e+01
Information Content per bp:1.751
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif17.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets34.7 +/- 21.4bp
Average Position of motif in Background68.3 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACWTACATCATTHAMA
--ATGCATAATTCA--
 C G T A A G T C C G A T A C G T C T G A A T G C C G T A C G A T T G A C G T C A A C G T A G C T G T C A C G T A G T A C C G T A
A C G T A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACWTACATCATTHAMA-
--TATCATAATTAAGGA
 C G T A A G T C C G A T A C G T C T G A A T G C C G T A C G A T T G A C G T C A A C G T A G C T G T C A C G T A G T A C C G T A A C G T
A C G T A C G T C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

HNF1B/MA0153.2/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACWTACATCATTHAMA
--GTTAATNATTAAC-
 C G T A A G T C C G A T A C G T C T G A A T G C C G T A C G A T T G A C G T C A A C G T A G C T G T C A C G T A G T A C C G T A
A C G T A C G T C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACWTACATCATTHAMA
--ATGAATAATTAATG
 C G T A A G T C C G A T A C G T C T G A A T G C C G T A C G A T T G A C G T C A A C G T A G C T G T C A C G T A G T A C C G T A
A C G T A C G T T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

HNF1A/MA0046.2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACWTACATCATTHAMA
-AGTTAATGATTAACT
 C G T A A G T C C G A T A C G T C T G A A T G C C G T A C G A T T G A C G T C A A C G T A G C T G T C A C G T A G T A C C G T A
A C G T C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACWTACATCATTHAMA
-ATTGCATCAT-----
 C G T A A G T C C G A T A C G T C T G A A T G C C G T A C G A T T G A C G T C A A C G T A G C T G T C A C G T A G T A C C G T A
A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACWTACATCATTHAMA
---TTAATNATTAAC-
 C G T A A G T C C G A T A C G T C T G A A T G C C G T A C G A T T G A C G T C A A C G T A G C T G T C A C G T A G T A C C G T A
A C G T A C G T A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACWTACATCATTHAMA--
--ATGCATAATTAATGAG
 C G T A A G T C C G A T A C G T C T G A A T G C C G T A C G A T T G A C G T C A A C G T A G C T G T C A C G T A G T A C C G T A A C G T A C G T
A C G T A C G T C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACWTACATCATTHAMA
-ATTGCATCAK-----
 C G T A A G T C C G A T A C G T C T G A A T G C C G T A C G A T T G A C G T C A A C G T A G C T G T C A C G T A G T A C C G T A
A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACWTACATCATTHAMA-
TCACCCATCAATAAACA
 C G T A A G T C C G A T A C G T C T G A A T G C C G T A C G A T T G A C G T C A A C G T A G C T G T C A C G T A G T A C C G T A A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A